Report for 4963.m00154

 > 4963.m00154, length: 863, copies: 2 

MALLVLVAVLVFEAAVRADGQTGFLSIDCGLEADDSYPDDLTGITYVPDGHYTDAGENHKVTTVYRNAWWGPDRT

LYTVRSFPSAEGQRNCYSLPNDVRSKYLVRLKFLYGNYDGLDSSSLKFNLTLGVKHWDTVSIDTTDGNDGYNVHE

AVFVAWASWAPVCLINIGQGTPFMSMVELRPLGILPYPAVMGNVSLSLYVRSNVGSSPDDDKLVRYPDDQYDRFW

STDEAHPLSTNISTQTTIQASTEFAVPSPVLQKAIVPSGNSMKLVFFSDQVDVLLHNHFVILHFADFQNNKSREF

TVSIDNGVQSSPYSTPYLKGLSVTGGWSSNSEGKYNFTIAATATSALPPILNAYEVYGRIIHDNPTTFSQDFDAI

MAIKYEYGIKKNWMGDPCFPPEFVWDGVKCSDAGDKIMRIISLDLSNSKLNGSISNFFTLFTALKYLNLSCNQLN

GTIPDSLLKNNGSIDFSYESDGNMCKTHATPSLSRNTLAVSVVAPVLVLAILVLAYLIWRAKRKLNTSSTDLAMV

PELMGAPGHITNHWDHLQKPENRRFTYQELEKFTENFKHLIGHGGFGHVYYGCLEDSTEVAVKMRSKLSSHGLNE

FLAEVQSLTKVHHRNLVCLVGYCWEKEHLALVYEYMSRGNLCDYLRGKTGMGEILNWKTRVRVALEAAQGLDYLH

KGCNLPIIHGDVKTNNILLGQNFKAKIADFGLSKTYHSDSQTHISAAAAGSMGYIDPEYYTTGRLTESSDVYSFG

VVLLEITTGEPPIIPENGHIVQRVKQKIVSGNISSVADAHLGGAYNVSSMWKVVNIAMMCTTDIATQRPKMGDVV

VQLKESLDLVEVHGDRGDMENLASDTMSSMSTFGPSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	438	462	0.027
Ser/Thr pkinase [Pfam fs]	560	762	1.7e-42
Ser/Thr pkinase [Pfam ls]	560	828	1.4e-35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	414	437	0.23
LRR [sensitive, ls]	414	437	6
LRR [sensitive, ls]	438	462	0.0011
LRR [sensitive, ls]	438	462	0.027

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	415	828	1e-42
Xa21 [O. sativa]	417	649	2e-13
Pto [L. esculentum]	546	836	3e-52
Rpg1 [Hordeum vulgare]	546	828	1e-31
Rpg1 [Hordeum vulgare]	550	836	6e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	487	509	out -> in

Report for 4963.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)