Report for 4965.m00129

 > 4965.m00129, length: 742, copies: 2 

MSLSKTIGFISGVNECVNLFQWARSAISSLHTRWSGTQDQKLQDEVLQLQSGLQRLKDTLPAMYDLIDRAEWRSH

EDCVAKLLPNLKDAVYNADDLLDEFRWYEQKVALEGNAASQSPFLEFFDCVIQGRFNKVTDIIERLNNVSSELEK

LGLREIPQRFDKTLRPETSSFPSDREIYGRDNELEKVMELLSVPKNYTGVHSKRKRGSNDASTSTSTSNQVSVPI

LPIVGIGGVGKTTLAQHICNHLLVKSHFDPVIWIFVSDDFDVKRLTKEAIESASGKEAKTDHLDSIQHVLRENVK

NKRILIILDDVWDDALKENGQCWKKFCSPLANVCQGSMMLITTRSSKVSNALGTLEPFTVNCLQNDIFWDFFKLC

AFGSDSSNNDPELECIGRSILPKLKGSPLAAKTLGRLLRMDHHTTHWKNVQKSELWELKQEETDILPALQLSYMY

LPLHLKRCFSFCAVYPKDYNFEKDSLCEIWVAEGFVEPEGDIPILDTSKKYFEDLCFNALECVVESLPCDFDRLI

NLRRYKSQGFVYDRMGQLHLGTHWEHEVRLMKNFNQFYGDLRLSNLGALSKDLAAEIKLNRKRYIGSLTLQWCLW

ISQEHNEMEVFQVLHPPTSLRSLKLMYYLGESLPCWFQEQNGCNEIAGVIANNNNGCISVFSSLTYLDISDCEKL

SNLNQFLQNLDIKWCPSLTFIGESEPADFTNLSHQELCIEDCPDLVSIGRGKLIAKLKKGGMAGKIG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	160	491	9e-62
NB-ARC [Pfam fs]	225	491	3.6e-61

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	53	505	1e-64
RPS2 [A. thaliana]	96	486	7e-21
Xa1 [Oryza sativa]	168	516	1e-61
Pib [Oryza sativa].	223	505	2e-14
RPM1 [A. thaliana]	225	514	6e-30
Pi-ta [Oryza sativa]	225	634	1e-13
Mla1 [Hordeum vulgare].	228	489	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	40	60

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4965.m00129

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)