Report for 4965.m00137

 > 4965.m00137, length: 450, copies: 1 

MSLSKTIGFISGINECVNLFQWATSALSTLHSRWSGKQQQKLQGELLQLQSSLQRLRDTLPANYDLIDRAEWRIH

KHCVANLLPNIKDAVYNADDLLDEFRWYEQKVALESNANQSPFMDFFNNMIQGSFNKVNDIMERLDNISSQLERM

GLHEIPQRFDKSLRPETSSFPNERKIFGRDKELKKVMELLGVPINLTRACYKRKRNSSTADASMSTSEKSRISCF

SVLPIVGIGGVGKTTLAQHICNHPQVKSHFDLIIWTCVSDDFDATRLIKEAIQSSSGKEATTDNLNCLQLGLSNI

VNNKRFLIILDDVWDDALKENGQCWERLCLPLENGLQGSMVLVTTRSSKVADGVSTMDPFTLDGLKDDIFWDFFK

LCAFGSQSSNNDPDLEDIGRGILPKLKGSPLAAKTLGRLLRMNLQIPYWNNILLSELWDLKQEETDILPALRLSY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	159	450	4.2e-18
NB-ARC [Pfam fs]	227	450	5.3e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	4	435	8e-20
I2 [L. esculentum]	53	450	7e-49
Mla1 [Hordeum vulgare].	86	415	6e-13
Xa1 [Oryza sativa]	133	450	1e-44

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	40	60

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4965.m00137

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)