Report for 4967.m00149

 > 4967.m00149, length: 762, copies: 1 

MTMLPATAAALLVLVLQLMWSAEAQVAVGSGPPAGCPDRCGNVSVPFPFGIRDGCSLEGFGLTCNTTSNPPRLMI

GNSTLQVVNISLANSTLRAVDIDGAVNITYGQIDGNGTWVGVVASPYIVNETLNQLLVTGCNIQVTLVGSGGNVI

SGCSSFCSINDMYTGGVFRSPGNKCAGIGCCQQQVSIGRPSYRVELTNLDRDREFSGRVPEAVRIAELGWFDGLA

ADLLNVSLADTSRRNPVPVVLDWAVASTGLDVTLNAGLNKQAANNWSCPTAASGRKSACISSNSFCRNIADNYRS

GYVCRCDKGYDGNPYVAGGCQDINECERAKENGCFGECTNTPGAFLCRCPHGARGNATIPNGCTKSNLGLTIGVG

IGSGAGLFILALGAVFLTRRIKQRRARTLRQKFFKQNRGHLLQQLVSQKADIAERMIIPLAELEKATNNFDESRE

LGGGGHGTVYKGILSNLHVVAIKKSNVTVQREIDEFINETEVPLLVYEFISNGTLYHHLHVEGPTSLPWEDRLRI

ATETARSLTYLHSAVSFPIIHRDIKSHNILLDGSLTAKVSDFGASRCIPTEQNGVTTAIQGTLGYLDPIYYYTGR

LTDKSDIYSFGVVLMELLTRKKPYSYRSAEDESLVAHFSTLHAQGNLGDILDAQVIEEGTKEVNDVATLAVACAK

LKAEERPTMRQVEMTLESIRQEVLHSVSTKKSKELHVSWNHAISEGSIFYQAVDTSIVIVSDVGSSDNLCDGAVI

GRNRFPGTQCRQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	445	492	0.00021
Ser/Thr pkinase [Pfam ls]	445	687	9.4e-21
Ser/Thr pkinase [Pfam fs]	493	590	3.7e-21
Ser/Thr pkinase [Pfam fs]	604	625	8.8e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	421	692	3e-42
FLS2 [A.thaliana]	437	695	6e-31
Rpg1 [Hordeum vulgare]	438	710	2e-27
Rpg1 [Hordeum vulgare]	438	694	2e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	370	392	out -> in

Report for 4967.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)