Report for 4967.m00152

 > 4967.m00152, length: 1365, copies: 1 

MATSPSALHMQAVALGAAVFLLSCLASAQQPPAPGCLDKCGDINITYPFGVGGAHCFRDKSFQLECNVVVNNSHP

RLIMPAYNQQLLSLSPDGEALAALDIQHEAYYYNCNASHPTASASSQPNNMTFATLNKSTVYRFPVSTYRFNATT

NSYVVPVALDWAIRDVHNCSAAKLNATNYACRSANSKCSDTTDGAGYRCRCSGGYEGNPYLHAGCQGLTTGSIIG

IGVGSGAGLLVMALGAAFLTRNIKNRKARILRQKFFKQNRGHLLEQLVSQNADIAERMIIPLAELEKATNNFDES

RELGGGGHGTVYKGILSDLHVVAIKKSKVAVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISN

GTLYDHLHVEGQPSLPWEYRLRIATETARALAYLHSAVSFPIIHRDIKSHNILLDVSLTTKVSDFGASRCIPAEQ

NGVTTAIQGTLGYLDPMYYYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSPQDDSLVAHFTALLTHDNLSDILD

PQVKEEGGKEVNEVAVLAVACVKLKADERPTMRQVEMTLETVRSSLLRQELVPSVAAEESKEKHVSWSYPSYRLI

LALEFMSISAKSPYYIRLAKPASKQASRTTYEVRAKMSEMAVALAILLVGLAPATPLSSAQQPPGCPSTCGNISI

PYPFGIGAGCARDEGFQLECNHTSSPPLLIVSNSTGGRHRQQLLSLSLADGEARTFLTAKRRCYNSSTGDMVSEN

DQNATEMSLSGTPYRFSRSRNRLVALGCPNLAYLVDGRGSYISSCTSICRTPESVAAGSTVGFTGEGCCQSSIPY

SVDVYKPDIIGFKQGQAGDSVLLNSTAASSILQSSTVCRYMYLAEDRWIDAAYRDGAVDFNRTDDFAVHVVLDWA

VRNAGNCSAARRNLAAANYACRSADSVCVDTGDGDGYRCNCSKGYEGNPYHDGGCKANFIRFGRSAKTSTSASGQ

RSTRASACASTRWDRTSAAARRVLVATRPFKLAALKLIKLVSQKADIAERMIIPLAELEKATNNFDESRKLGGGG

HGTVYKGILSDLHVVAIKKSKVAVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISNGTLYDHL

HVEGPTSLPWEYRLRITTETARALAYLHSAVSFPIIHRDIKSHNILLDGSLTTKVSDFGASRCIPAEQNGVTTAI

QGTLGYLDPMYYYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSPEDDSLVAHFTALLTHGNLGDILDPQMNEEG

GKEVKEVAMLAVACVKLKADERPTMRQVEMTLETIRSSSLQQEVVPSVAAEESKEKHVSWSYPVCEGTSIESSRQ

YSYEEENLLSSRYPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	297	463	2.8e-42
Ser/Thr pkinase [Pfam ls]	297	560	7.2e-46
Ser/Thr pkinase [Pfam fs]	475	498	2e-05
Ser/Thr pkinase [Pfam fs]	1040	1206	1e-42
Ser/Thr pkinase [Pfam ls]	1040	1303	3.2e-46
Ser/Thr pkinase [Pfam fs]	1218	1241	2e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	273	565	1e-52
FLS2 [A.thaliana]	289	568	5e-37
Rpg1 [Hordeum vulgare]	290	584	1e-31
Rpg1 [Hordeum vulgare]	290	567	2e-25
Pto [L. esculentum]	1011	1320	2e-51
FLS2 [A.thaliana]	1032	1314	4e-38
Rpg1 [Hordeum vulgare]	1033	1310	5e-32
Rpg1 [Hordeum vulgare]	1033	1310	9e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4967.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)