Report for 4967.m00160

 > 4967.m00160, length: 739, copies: 2 

MAWSMPPLALFAAVLALQQAIAAAAAAGDCPTTCGDVAVPFPFGIGAGCYHLPGFNLTCDRSSDPPRLLLGDAAA

FQVLNVSIVNATVRAARVGGINITYGGGNTSSADEGRGAWRGLGDGGPFALSEDRNELVVVWGCDVVALLTDGGG

SGNSSNVTISGCASFCPGTDAGGQAIAAPAGSTMSLTEDRRCTGVGCCQMPISVGRDSYQVRLRRLNPSPPQPPP

PQGAGDPTVVLIAEQGWVAEASRSTRGYPLPVTFDETAVPVLLGWMIASTRVGADGEVPVNSTCPADAARSACKS

SHSSCRNVSSSARAGYVCDCDAGFHGNPYLATGCQGLSIGVGVSSAASLILIVIMAIFIIRKQKRRRAKKIRQKY

FKQNRGQLLQQLVAQRADIAERMIIPLGELKKATNNFDRARELGGGGHGTVYKGILSDLHVVAIKKSKIAVQREI

DEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFVSNGTLYSHLHVSGPRSLPWSDRLRIATETAKAIAYLH

SSVSIPIIHRDIKSTNILLDDTLTSKVSDFGASRCIPVDQTGVTTKVQGTLGYMDPAYYYTQRLTEKSDVYSFGV

ILVELLTRKKPFSHLTPEGEGLVAHFVTSFTEGNLVGVLDLQIMEEADMKVVEVVATLAVTCVNLRGEDRPTMRQ

VEMALEGIQASRENVSGNLSAEKLGESNNVARDFMPSQEGRSMTEGTRQYSLEEEFLLSSRYPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	412	614	1.1e-48
Ser/Thr pkinase [Pfam ls]	412	676	3.9e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	343	676	2e-39
Pto [L. esculentum]	388	690	4e-51
Rpg1 [Hordeum vulgare]	402	694	6e-29
Rpg1 [Hordeum vulgare]	405	683	6e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	338	360	out -> in

Report for 4967.m00160

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)