Report for 4971.m00138

 > 4971.m00138, length: 924, copies: 1 

MAEIIVLFVIKKIGIAVAGETLKLAKPLLANKTELKKAELVTALPVNMKLIKDELEVINAFLKELGMNGCKGEVV

ETWVRQVRRLAHDMEDVVDEFMYVIGKNKERESRAYVKKIIKKPKPLFSLDEIATKADRINRQLMELSKRLGRWT

QPILSGGSIPATKYDTEQQQLYLPGHDYSITDAELVGIDKNRQTLIESLCLEDCSLRIIAVWGMGGLGKSTLVNN

VYKKEATVSNFNYRAWLSISQSCRVLDIWRNMLKELCGKESREFDAENMSSTELKVELTKILDQKRYLIILDDVW

LATDFLKIREVLVDNGLGSRVIITTRIEEVASIAENGCKISLEPLDNHDAWLLFCRKAFPKIEDHICPPELEQCG

MDIIDKCDGLPLALVAIGSLLSFKSKNNKDWRLFYNQLISEVHNNENLNRVEKILNLSYKHLPNHLKYCFLYCAM

FPEDYLIHRKRLIRLWISEGFIEQKGACSLEDVAEGYLAELVQRSMLQVVACNSFDRVQCLRMHDIVRELAIFQL

KKESFCTIYDDTHGVAQVGLDSRRVSVLRCNNDIRSSIDPSRLHTFIAFDTTMALSSWSSFIFSESKYLNVLDLS

GLPIETIPYSVGELFNLRFLCLNDTNVKEFPKSVTKLSNLQTLSLERTQLLNFPRGFSNLKKLRHLLVWKLVDAT

YKSLNNWESMEPFEGLWDLKELHYLNEVRATKAFVSNLGNLSQLRSLCITYVRSSHCVQLCNSLSKMQHLTRLNI

RARNEDELLLLDDFTLSNPLEKLELVGQLSEGTLESPFFSIHGYKLLQIELSWCKLTVNPVARLAEFSDLTELRL

TRVYTGPWLYFPANWFPKLKKAVLWDLQQVKQIFIQEGALANLHYLHIDSLMELRDIPVGIEFLSSVKEAYFTRM

HSDFVRNLRTGKISHIPKVHWSTQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	172	477	5.3e-81
NB-ARC [Pfam fs]	184	477	3.5e-80
LRR [Pfam ls]	616	638	4.8
LRR [Pfam ls]	639	661	0.39

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	593	615	0.42
LRR [sensitive, ls]	593	615	11
LRR [sensitive, ls]	616	638	0.19
LRR [sensitive, ls]	616	638	4.8
LRR [sensitive, ls]	639	661	0.015
LRR [sensitive, ls]	639	661	0.39
LRR [sensitive, ls]	795	821	0.35
LRR [sensitive, ls]	795	821	8.9
LRR [sensitive, ls]	867	890	0.81
LRR [sensitive, ls]	867	890	21

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	12	805	9e-57
Mla1 [Hordeum vulgare].	47	756	7e-61
RPM1 [A. thaliana]	51	919	1e-114
Pib [Oryza sativa].	57	368	6e-17
Pi-ta [Oryza sativa]	78	646	3e-39
L6 [L. usitatissimum]	82	528	1e-14
M [L. usitatissimum]	172	528	7e-17
Pib [Oryza sativa].	182	894	1e-56
RPP5 [A. thaliana]	184	889	4e-19
N [N. glutinosa]	185	709	1e-14
RPS2 [A. thaliana]	185	883	8e-38
Xa1 [Oryza sativa]	206	750	2e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4971.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)