Report for 4990.m00138

 > 4990.m00138, length: 609, copies: 1 

IRYPFRLQGDPLGCGDEAYELVCRDGRAIIHINTGKYFVKDISYNESRFWVVDANLDNSSCPLPLWNNLPYFNDM

GTKLYTSAVRWATFLNCSRAINNGMYMPVACLSGNTSFVYVLTTSSSYYVQNIEPSCGYLAVIPVDDRTKNVPDY

ASYADVVKFMRNGFPVSFPRVESPSHSPVIKACARDTFQNFKEQMYSRNIQNWTSAIIGTELQFLGCVINYYSSA

TQVWVTLVLVFAVEIVKCIIVLCRFILAPLTVLTFLGYKYRKTRISIDAVEKFLRMQQAHGPKRYAYTEITAITG

HFREKLGQGGYGSVYKGFLPGDGHVAIKMLSNSMCNGEEFISEVSTISRIHHVNVVRLVGFCSEELRRALVYEYM

PCGSLDKYIFSPEKSLSWDKLNEIALGIARGIDYLHHGCDMQIMHFDIKPHNILLDSNFTPKVADFGLAKLYPRD

DSLVPVSAARGTIGYIAPEMISRSFGTISCKADVYSFGMLLLDIAGGRRNREQHTSNSAHLYYPALVYDCLTQQE

VSEISEDIGIHWVERKLCIVGFWCIQMKPAERPSMSEVVEMLESDDPDNLQVPPRPFFGVDDHISEMDDCCNSSS

KSSAISEDD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	300	567	1.9e-48
Ser/Thr pkinase [Pfam ls]	300	567	5.3e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	207	567	9e-29
Pto [L. esculentum]	261	568	9e-37
Rpg1 [Hordeum vulgare]	288	569	8e-32
Rpg1 [Hordeum vulgare]	289	571	8e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4990.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)