Report for 4990.m00144

 > 4990.m00144, length: 630, copies: 1 

MGTILATAFLLSVLSHGSYIAMASSSWDDQDFFKHCPPSRCSKHGPEIRFPHRLQSSNTPSSCGSSHAKLICSGQ

DTILHHPFLGPCKVTAIDYKKAVMKIIPFGGSSSPCLLHKFNSTNLSADVNDQNQLYLTEPGRIVRCSKEFTTSR

ASMIDGYNTVIADKVVRLIPCLRDTTSHFSYLVSTRLYLYALPLDCMVVSKGNIPIPNPYTAGLTFKQMAERIIN

SAEITLDLLLGSIPYNCTRCEQQGQRCAFSSQRNQTFCMHHGSRVKVIAATSVAAFVAVSLVVATVLYLSLKQRY

NEEVHLKVEMFLRTYGTSKPTRYTFSQVKKITRRFKEKVGQGGFGTVYKGKLLNGVPVAVKMLENPTGDGEDFIT

EVATIGRIHHANIIHLLGFCSEGTRRALIYEFMPNESLEKYIFLHDHNTPQELLSPNKMLDIALGIARGMEYLHQ

GCNQRILHFDIKPHNILLDYNFSPKISDFGLAKLCPRDQSIVTMTKARGTMGYIAPELYSRNFGEISYKSDVYSF

GMLVLEMVSGRRSWDPSIKNQNEVYFPEWIYEKVITGQEFVLSREMTEEEKQMVRQLALVALWCIQWNPRNRPSM

TKVVNMITGRLQNIQVPPKPFVSYESHPMP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	333	605	1.5e-54
Ser/Thr pkinase [Pfam ls]	333	609	4.8e-55

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	265	604	2e-33
Rpg1 [Hordeum vulgare]	319	608	1e-28
Pto [L. esculentum]	322	604	7e-40
Rpg1 [Hordeum vulgare]	323	604	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	272	294	out -> in

Report for 4990.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)