Report for 4990.m00165

 > 4990.m00165, length: 640, copies: 1 

RHHKCPSFSCGHLKGVSAPFRRAADPPGCGSKSYELVCSDTNATILIDNATYHVNEINYDYRRFWVVDANIAGST

CPLPQWNHLLDQYKRKVSGHRIEIELAPGAYNHAYFVRCSREVKDNGIYRPVTCASSNYSFIYVLLSSDSDNPGY

IESLEPSCGYLAMTLLGDWSTTVPRNASYEDVKKFMREGFAIRFPRIYGAGSINECLMDSISELRNGIEPRSSTG

TAISDRLIVISIIDLHFWFCLIGYPSGILIAFGMWIVKCIAVLCRFVLVPLAILTFLAHKYWKTRLAIDAVEKFL

QMQQVLGPTRYAYTDLTAVTSHFRDKLGQGGYGSVYKGVLLSGDVHVAVKMLNGASTYDGEEFISEVSTIGRIHH

VNVVRLVGFCSEELRRALVYEYMPQGSLDKYIFSSERSFSWDKLNEIAIGIARGINYLHQGCDMQILHFDIKPHN

ILLDDNFVPKVADFGLAKLYPRNKSFVSDRALRGTVGYIAPEMVSRSFGVISSKCDVYSFGMLLLEMAGGRRNAD

PNTNPNASQSYYPSWVYGQLTGEQVGETSGAADMHELQKKLCLVGLWCIQMKSHDRPTMSETIEMLEGDVNALQV

PPRPFFCDGDFMPNVMDSYLHSSELTAISEDDGAIEFASN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	321	518	2.3e-50
Ser/Thr pkinase [Pfam ls]	321	593	2.2e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	272	591	2e-27
Pto [L. esculentum]	310	592	5e-42
Rpg1 [Hordeum vulgare]	310	592	1e-28
Rpg1 [Hordeum vulgare]	311	523	6e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	240	262	out -> in
putative TM domain	267	284	in -> out

Report for 4990.m00165

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)