Report for 5001.m00079

 > 5001.m00079, length: 798, copies: 1 

MQLDINNRSWEGDTRSKFASAMNGIAASATYQDPSLPSLVPYMTSRIFISNYTYSFPISPGRIFVRLYFYPVAYG

YYASEDAYFGVKTNNLILLDNFNASQTAQAANYAYILREFSLNVTLGSLDLTFFPSTQNGSYAFVNGIEIVPTPD

IFTTRTPTHNTEGNLDPSDIDSMTSFQTMYRLNVGGQAIIPQGDSRFYRSWEDDSPYIYGAAFGVTFGKDSNVTI

TYPGTMPNYTAPADVYATARSMGPNWQINLNYNLTWILSVDAGFYYLLRFHFCEIQYPITKMNQRSFFIYINNQT

VQDQMDVIRWSGGIGMATYADYLIVTVGSGQMDLWVALHPDLSSRPQYYDAILNGLEVFKLWDIGKKNLAGLNPP

LPPQPKTDVNPKGVSGGGKLKAAVPAAICAVVVLITACFCVCIICRRKKVAKHSGKTDKKCLTYQTELYKSPSNL

CRNFTFHEMQIATSSFDETLLLGRGGFGDVYRGEIDNGTTVAIKRSNPLSLQGVHEFQTEIETLSKVRHGHLVSL

IGYCQEKNEMILVYEYMARGTLREHLYSTKRPPLPWKERLKICIGAARGLYYLHTGPKETIIHRDVKTANILLDD

KWVAKVSDFGLSKVNPDIDATHVSTVVKGTFGYFDPEYFRLKQLTQRSDVFSFGVVLFEILCARPPVNTELPEEQ

VSLREWALSCKKIGTLGEIIDPYLQGEIAPDCLKKFADCAEQCVADRSIDRPEMGDVLRNLEVALKMQECAENNS

KFSEETTSSKTTPDMMTIMDTDKQSTYSTMSITGQRTIFSDMMDPQAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	466	666	1.1e-42
Ser/Thr pkinase [Pfam ls]	466	738	3.7e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	364	736	1e-38
Rpg1 [Hordeum vulgare]	442	736	4e-33
Rpg1 [Hordeum vulgare]	444	746	7e-30
Pto [L. esculentum]	454	744	5e-85

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	397	419	out -> in

Report for 5001.m00079

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)