Report for 5006.m00102

 > 5006.m00102, length: 430, copies: 1 

MDVCDIAIKNTTSYACISGNSNCVDDIKGGYRCKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFD

CSCYPGSYMKNGFCLPNQKSTFPARHVIGASVGFVILVIAITFACYVQQRRKLQHIKNNYFQQHGGLILFEEMKS

QQGHAFKIFSEEELQQATKKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKKEFGPMLVYEFIPNGT

LFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILHGDVKSSNILLDNNFSAKVSDFGASILAPTDEMQ

FVTLVQGTCGYLDPEYMQTCQLTDKSDENKLEDMLNDQIKNNENMEFLEEMAELARKCLDMSSINRPSMKEIGDE

LGRLRKVMEHQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	171	200	7.8e-06
Ser/Thr pkinase [Pfam ls]	171	377	6.6e-13
Ser/Thr pkinase [Pfam fs]	214	291	7.2e-17

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	89	380	2e-16
Pto [L. esculentum]	159	386	9e-26
Rpg1 [Hordeum vulgare]	159	379	2e-19
Rpg1 [Hordeum vulgare]	164	388	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	102	124	in -> out

Report for 5006.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)