Report for 5011.m00082

 > 5011.m00082, length: 736, copies: 1 

MAMLRPAAMDLFLSATSIVSNANEWFEFLGTAFSAASLLLSRWRRRRQGDEAERRQLQWKGQDAKMKQLHYCMLQ

LPDLIHHAEWLSFVKDDKEVAKLLPELKARVHDAYDLLEEFNHHHHHQQQLQLDLGQDAAAEKAGDDFLQSIAGG

NTVREILDDLNCLRNTLEGVIDRHARSEPHQIGKLLRPAMTSFYDKSKFRSLEDEVNELLELLGVKICSARPHKR

RIKGETASASKRTKRNSGVPSASTRTSCSNQEIASDNVTVLAISGIGGVGKTTLARQVYNDERVKGYFDVRIWIS

VSDDFNVKRLTKEFIEFALANWMQSDNLCNLQQSLTESIVKFRFLLVLDDVWDDVYANQDNRWQNFLEPLKSAQQ

GSAILLTTRSQRVADLVNENRHFRLEGLPPTIFDEFFEACAFGSDRCGVNPELNPIGKRIIPQLKRCPLAAETLG

RLLKPMLDREHWNQIAGSELWELKQEKYDILPVLRLSYLYLPSYLRNCFLFCSMYPKNHQFDKDTLVNSWIAAGL

VESCKGGKLESNGYQYFEDLLHRSLLQKESNSPTDSKYVMHKLIHDMAQLISEHECFIVKGETDLTKIPQGVRHL

SIIGSSSLSETNLIMVCKYKTLRSIVCHGVETYILTAVAKYWFEELTKIRMLGFLSCEVNSLPENIDNLKLLRYL

NISDCTFEELPQSFWRLQNLQIVDAQKCRVQQIPDDFNRLGNLQRFKLRGRIIKQPGTYEL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	235	531	2e-42
NB-ARC [Pfam fs]	261	531	2.7e-48
LRR [Pfam ls]	671	693	0.27
LRR [Pfam ls]	694	716	3.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	648	670	3
LRR [sensitive, ls]	648	670	77
LRR [sensitive, ls]	671	693	0.01
LRR [sensitive, ls]	671	693	0.27
LRR [sensitive, ls]	694	716	0.14
LRR [sensitive, ls]	694	716	3.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	111	731	5e-65
Xa1 [Oryza sativa]	202	719	2e-66
Mla1 [Hordeum vulgare].	252	721	4e-27
Pib [Oryza sativa].	260	700	6e-25
RPM1 [A. thaliana]	265	709	5e-40
RPS2 [A. thaliana]	265	711	5e-27
Pi-ta [Oryza sativa]	265	700	5e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5011.m00082

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)