Report for 5021.m00132

 > 5021.m00132, length: 1789, copies: 1 

MSGGAEMIAGAVVQRVAGMLGDNAWERIQLLWNFQEDVQDMKSKMTDLKVALSYADKHSRETDDDALVLRHWLNK

YKSVAYDMEDTLDELLTNAMIWENNPCTVKLFFSSINPLIVRITMSSKMRNIRMKLDKIAEDQKKFPSMQLANPT

GQDSTDKWRETFIGHTDEIEMVGRAREKKEILIKVLQNDGGQEISIIPVVGLGGMGKTTLAKAVYTDKETHMFDV

KAWVHVSMEFQLNKIVSGIISHVEGSTPANIADLQYLKSQLDRILCNKLYLIILDDLWEEGWSKLEKLMEMLQSG

KKGSKIIVTTRSEKVVNTLSTIRLSYFHTVDPIKLVGMSIDECWFIMKPRNMENCEFSDLVDIGKEIAQRCSGVP

LVAKALGYVMQKHRTREEWMEIKNSNILDTKDDEEGILKGFIQDTDGQPLQKVAMEYVNELLGMSFLTIFTSPTV

LASRMLFKPTLKLHMHDMVHELARHVAENRNTKRDNLNFHYHLLLNQNETSSAYKSLATKVRALHFRGCDKMHLP

KQAFSHTLCLRVLDLGGRQVSELPSSVYKLKLLRYLDASSLRISSFSKSFNHLLNLQALILSNTYLKTLPTNIGC

LQKLQYFDLSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPESCCQLHD

LAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYCLRLENLPSCIGDLQLQSL

DIQGSFLLRDLPNSIFNMSTLKTVDGTFTYLVSSKVEKLRENLKLEGCCKLDGGSTDLCSRITELKKTHCHELEI

QGLEDFKHLEGIEHAILLNSLKLTKLIFSWQPKQYTNETAHHKTVLGMLVPPRSVHHLAIKGYCGIELPKWMLDI

RSYLPHLTTIFLHGLMECNRLPPLGCLPHLRALLMTKMPKIKSVGPEFYGDYGSCQKLRMIILASMDNLEEWWTT

RSSKQDNELSLIPDLQMLWASDCPKLKFLPYPPRSLTWFIENSNHVLPEHGFGNLTSATYPLHLSIERAPNSREM

WRRAQHLSSIESLTLMSIAGLRALPEAIQCFTSLWRLSILGCGELETLPEWLGDYFTCLEEISIDTCPMLSSLPE

SIRRLTKLKKLRITNCPVLSEKCQGEDRHKIAHILEPIFLLADTVSRVLVTANWRSKPLDFRWHLSLLKKRKGWL

SCRSSLSVAAYQAGLNLDICLSVRQVSRWGSEKFRTGGGAHIRESVPPNHMEDYPSGRSKAAIGFLRRGGGFSSR

NQSTEERTIQNYDGPGITTRLNPMKTRLSDNQERPRYLRDSFRSSTSMAIHGSSSKVPLRKFGDEKRRQTLLAGV

DIAESSSRNAGGKHLEGSNKRIVVDDRSSDVLHTETEGLATEQDQLIAPNAGVSDSASSSDISEHAVESLVRSAA

PSSRTRRQKDKELNLGQSGVCSSSCTNRPTISRYAPADVKRPCNHASGVQQHGHNNLDCTSVPNFLPSGCSSGSV

YSRRFDAMRKRTSDGGSFSRSRGLSGTASLDDSPPAYPAIAGPRIRTTTTERASQQNALRSRRNFQDSAVSVRTR

RPPWGARFRISEEREDGMISQRDSSIGNQQSDQVHSSSEEASTESSSRPFSAELPHAIYSSRGEGSNAFTARRRR

SSSLYEERPPQTFHDLFRERNGRRHISIEGIAEVLLALDRIEQEAELTYEQLMVLETNILLGAFTSHDQHSDMRM

DIDNMSYEELLALGDRIGSVSTALSEEQFVKCLRRSIYIPVATKANAQVVDDIKCSICQGVYCY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	154	467	2e-21
NB-ARC [Pfam fs]	167	397	1.2e-37
LRR [Pfam ls]	534	556	6.9
LRR [Pfam ls]	580	602	0.92
LRR [Pfam ls]	603	626	0.17
LRR [Pfam ls]	651	674	0.78
LRR [Pfam ls]	675	698	2.3
LRR [Pfam ls]	699	722	0.9
LRR [Pfam ls]	746	769	5.7

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	534	556	0.33
LRR [sensitive, ls]	534	556	6.9
LRR [sensitive, ls]	557	579	1.1
LRR [sensitive, ls]	557	579	23
LRR [sensitive, ls]	580	602	0.044
LRR [sensitive, ls]	580	602	0.92
LRR [sensitive, ls]	603	626	0.0083
LRR [sensitive, ls]	603	626	0.17
LRR [sensitive, ls]	627	650	0.65
LRR [sensitive, ls]	627	650	13
LRR [sensitive, ls]	651	674	0.038
LRR [sensitive, ls]	651	674	0.78
LRR [sensitive, ls]	675	698	0.11
LRR [sensitive, ls]	675	698	2.3
LRR [sensitive, ls]	699	722	0.043
LRR [sensitive, ls]	699	722	0.9
LRR [sensitive, ls]	723	743	1.6
LRR [sensitive, ls]	723	743	32
LRR [sensitive, ls]	746	769	0.27
LRR [sensitive, ls]	746	769	5.7
LRR [sensitive, ls]	906	928	2.6
LRR [sensitive, ls]	906	928	54
LRR [sensitive, ls]	989	1012	6.3
LRR [sensitive, ls]	989	1012	130
LRR [sensitive, ls]	1108	1131	0.68
LRR [sensitive, ls]	1108	1131	14

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	6	757	4e-35
I2 [L. esculentum]	8	1150	2e-50
RPM1 [A. thaliana]	30	771	9e-32
Pib [Oryza sativa].	59	317	2e-11
Pi-ta [Oryza sativa]	72	658	1e-13
Xa1 [Oryza sativa]	120	1141	2e-33
Pib [Oryza sativa].	161	606	7e-24
N [N. glutinosa]	177	851	3e-25
RPP5 [A. thaliana]	192	1141	8e-16
RPS2 [A. thaliana]	192	738	2e-23
N [N. glutinosa]	498	751	1e-11
RPP5 [A. thaliana]	506	818	2e-12
FLS2 [A.thaliana]	541	790	4e-12
FLS2 [A.thaliana]	548	771	8e-14
RPP5 [A. thaliana]	553	824	4e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5021.m00132

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)