Report for 5071.m00138

 > 5071.m00138, length: 571, copies: 1 

MSDSELSQSTVVFGLRMWVLVGVAVGAAFVLFLVLLSVLCLLASRRRRRRRGPNTSPVQQLPVSAPPKNPQKVKA

PKDIQEVPAQATAAAAAKTPLAQVLQMPAPPPPPPPMAAAAPPPETVQIATGKEHRITYPEPPHRSGSSSHGSGE

APSVPEVSHLGWGHWYTLKELEAATEMFADENVIGEGGYGIVYHGVLENGTQVAVKNLLNNRYPTTNSSQLRCTE

ITTATQLDCLRVIATGIDHPRTVDRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVYEYVDNGNLEQW

LHGEVGPVSPLSWDSRVKIILGTAKGLMYLHEGLEPKVVHRDVKSSNILLDKHWNAKLSDFGLAKLLGSERSYVT

TRVMGTFGLDSAHYEHTPRIPDECSWLLIFSTLYRYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRP

PGEVNLVDWLKTMVSTRNSEGVVDPKMPQKPTSRALKKALLVALRCVDPDARKRPKIGHVIHMLEVDDFPYRDER

RGARAPVQARVADKPVAIEAGDRESDSSGNNSARQTEPFRWRNPES

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	178	206	9.3e-06
Ser/Thr pkinase [Pfam ls]	178	516	1e-33
Ser/Thr pkinase [Pfam fs]	260	378	1e-28
Ser/Thr pkinase [Pfam fs]	426	444	0.18

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	153	515	1e-48
Rpg1 [Hordeum vulgare]	166	514	4e-31
Rpg1 [Hordeum vulgare]	166	518	3e-27
FLS2 [A.thaliana]	169	516	7e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	20	42	out -> in

Report for 5071.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)