Report for 5119.m00131

 > 5119.m00131, length: 628, copies: 2 

MAPALCPLGWGQARRDLGIWISEARCPFAVGSRRGGWWVEGSIAAVRWAAADWGQPGGRSGRRRGAADPLPTARP

RFAAVEILEEVGGGDGDGRSLRGSLPASEDGLVGVRRADGGVWPAAAAAGAAPAGLPVLVFLLLAAAGLRVVPFL

ASGDVSFAAPVPAAVVYPPPPPPRIASPPPPRNHIKPHYVPRSSARSHSNSTRASSGAGKNIEISREAATTIVAL

AGLAMLSFVGATIWFVKKKRRRIEPPASLPTQQPAPPPPPNYFPSSGGSSLTSDAFFISPGYHPVRLFSAGSHGY

PYSPADSAIGYSRMLFTPENLAEFTNGFAEQNLLGEGGFGCVYKGILPDNRLVAVKKLKIGNGQGEREFKAEVDT

ISRVHHRHLVSLVGYCIADGQRMLVYDFVPNNTLYYHLHGHPRIIHRDIKSSNILLDDNFEAQVSDFGLARLAAD

SNTHVTTRVMGTFGYLAPEYALSGKLTAKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLLKAIEHR

EFGDLPDPRMENRFDENEMYHMIGAAAACIRHSAAMRPRMGQVVRALDSLADSNLNNGLQPGRSEVFLEPQSEEI

RLFQLREFGSRDCSDEMSQASWRSRRDL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	328	416	8e-17
Ser/Thr pkinase [Pfam ls]	328	569	1.8e-32
Ser/Thr pkinase [Pfam fs]	418	498	2.8e-22

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	283	575	7e-25
Pto [L. esculentum]	303	573	2e-46
FLS2 [A.thaliana]	306	512	1e-28
Rpg1 [Hordeum vulgare]	311	575	8e-29
Xa21 [O. sativa]	315	414	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	117	139	out -> in
putative TM domain	219	241	in -> out

Report for 5119.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)