Report for 5143.m00192

 > 5143.m00192, length: 632, copies: 1 

MAESAVSAAVGSISNLAAQETSLLCGVMDEVGFLKAELERLHGFLEDAKHKRRSGDASAAVLVGQIRDAAYDAEN

VIEASEYMVKRNKLKKGFMGAISRYARLPTDLIALHKIGVEIQWIRRKISEIFYSANRLKIVGLGNPTTDIGHAD

DEFPQDYDIMYQNFEDDDVVGFDNEYNEIVEKLVEQENELSVVSIVAMGGAGKTTLARKIYNSTRIRNHFDTTAW

VTVSQKFKGIDLLKDIMRQIMPNKLESREIDQMQELEVGKKIHEFLLNKRYVVVLDDVWATDTWNQINRVGKVFP

DANNGSRVLLTTRKEDVANHIEMSTYIHPLKLLDDEKSWELFSRKSLPSYKRSSLQDVNEFEELGRKLARKCNGL

PLALAVLGGYLSKNLNIQAWSDIFKSRISTKNGQMMRDILARSYNDLPNNYMKSCFLYIAVFPEDYSISTADLVE

LWTAECFVQPRRKYKPEELAYKYISRAEVSSFNTMTFYRNSFHHFFDDKILQATAYKRTILGFSVPSMFLLKLKF

LRVLHVENSTINNFSMAISECIHLRHLILRNCRSGSLKLGRCQDSHLGLHWFENMRKLPDGLGQLPSLKELVLKD

PLISEDDITCKDLRGKGCKVTYTRYMLSGGFF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	152	463	1.1e-88
NB-ARC [Pfam fs]	161	463	2.3e-88

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	1	475	9e-59
Mla1 [Hordeum vulgare].	5	458	9e-38
Pi-ta [Oryza sativa]	18	473	4e-35
I2 [L. esculentum]	34	458	1e-49
Pib [Oryza sativa].	41	319	6e-15
M [L. usitatissimum]	159	437	6e-18
L6 [L. usitatissimum]	165	437	1e-14
Pib [Oryza sativa].	165	473	7e-38
N [N. glutinosa]	168	437	7e-13
RPS2 [A. thaliana]	169	458	3e-30
Xa1 [Oryza sativa]	178	502	7e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5143.m00192

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)