Report for 5144.m00165

 > 5144.m00165, length: 1385, copies: 2 

MTLNVKKLDDRSRPMIFVGYEPGSKAYRVYDPTTRRVHVSRDVVLDEEAQWNWSGEDVTDADIDIDFTVEYTVVR

YPQVENATRQEPVNTSHPPVSPASLHTPASAPSSRTPTSSSPSSATSRVRFVSPPPFNEKDMDAEHDNDAPLRFR

LIDDILCPSSPPGLTTREMSEELLVATADEPASFADAEQQACWRQAMNEEMASIEANKTWRLVDPPPRQRPIGLK

WVFKTKKDAAGNITKHKARLVAKGYGWAVHHMDVKSAFLNGKLLEEVYVVQPPGFVIDGQEHKVLRLDKALYGLR

QAPRAWYSKLDASLLTLGFHRSSSEHAVYMRGTGMDRLVVGVYVDDLIITGGNTGELKQFKEEMKNTFQMSDLGL

LKYYLGLEVNQTEEGITTRLKLSKSSTAPSVDATDYRRIMGSLCYLVNSRPDLAYAVGYVSRFMEKPTVEHLATM

KRVLRYITGTINYGCCYKRKKEAAHLVGYSNSDLAGDLDTRKSTSGVFFFLDENLITWQSQKQKVVALSSCEAEY

IAATTAACQGVWLARLLAELRGEEADAVMLKIDNQSAIMLSKNLVFHDRSKHIDTRYHYIRKCIEEGRVKVEFIG

TDGQLADMLMKALGRDRFIELRSRIGLVEYSRVFVCWFFLARSPIVWVNPNSINAKKMIKFSYTDLRKEYKSCFL

YLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAVHHAERCFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFI

TRIAKKQHIVEARLSRHLARHFSIFNDIRLRGSDRIDKFLRKLPETSQMSMLKVLDLEGCQCFQRNQHYLKDICN

NILLLKYLSLRRTDVTQLPSEINNLYELEVLDISQTEVPEYATKHILLLKLKRLLAGCIDSNSSSNAKNNISFRN

QAPSSSSVQIPHKIKKMSSMEVLSNVKASWTSRELKDIGKLWQLRKLGVVIDDKDSILKNLLTAISDLCECLRSL

SITIFPSTKGEGTPSNGDLPQYISHCLKYRPKLLESLCLQGTTQKGQLLILFVERFTKLAKKNLEGLGDLPNLCY

VRLRHKGYTDGKLTFNEHKFKNLKYFLVEGNNMRGIKFQKGAAPRLEKIVLSFTNIESLHGVGDLPKLEELELKR

NKFLLSLSEEGETLEKYMLTFKKDEFQHLKYLLAEGFSKSFETNITFEDGATPKLEKIILYSFANIMSHPGVSSL

PKFKELELKGNKPLLSSFENANKISKVTLRSTLMQHADLQIFAKRPSICCLILLGNSYDDSLLTFNKGEFPKLDL

LIVECPTITDISFTEGAAPMLEKIIWSFTKMNSLSGIDNLSKLKELEFIGDLVPDQVKIDINTHRKHPVLNHKLP

QHQDQENGSEQGEEEDLKFPACSWLSLKNKYWSVN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	659	706	2.4e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	829	851	1.2
LRR [sensitive, ls]	829	851	13
LRR [sensitive, ls]	1095	1116	0.57
LRR [sensitive, ls]	1095	1116	6.2
LRR [sensitive, ls]	1117	1140	2.4
LRR [sensitive, ls]	1117	1140	26

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	648	1115	2e-16
RPM1 [A. thaliana]	649	1123	8e-12
Pi-ta [Oryza sativa]	649	857	9e-11
Mla1 [Hordeum vulgare].	656	1102	2e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5144.m00165

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)