Report for 5144.m00168

 > 5144.m00168, length: 1067, copies: 1 

MAEVAVAAVTSLLGQIRNEGLFLGRVKSDVRFIKHEMESMRTFLEHLAETGGHHDPQVRTWMEQVRELARDCRSC

VDIYLQRGNPAAAPSGDTSAGPPWFVQSMVHQHYAGIELSELKERAYDVAQRRKRYGVVVAPKLEAMPPASSSEA

EDYDATRDKLAGGSSNSDLGRTSVLEGRFLENYCGEELAHWVMSTATMGSSASTTSIPSIAIVSPPIQEADDTAE

MVAIHDTLASVAATHFEHSLLVYLPAVHHNPSHIRIKLRVILCYILYQCDMEKESWHSRWGREYLSMVDEYRTSN

PVYAMKCYIYKLKIADICKGDTFKRLVQNIIQIGRMVTRLNGELERSVDAMLRLTNKKPLCILLKALDYLECGAD

FSDVEKYHQLRVERMPFQFKMLQLDEEKLLVATAQKLKGHFETNIPIHLSQATYESILREVFQASNKTLQAQEGT

TAPSPGVGTSHDVATATTTTTFDKDQIEEMIYIHMELQDMQPPQVPEAGKSLLKAELATPKPADQDDHEFTSAIE

ETKRKIAQVGSEIGEQFLIECLVDEIKELLGGKRTLIIIEDDKNYVSQWYGLRNSLKQLSCSGSAMIVTTQDTQR

AKEICYPPREPITNSIVGMYHDILLKVTSQRVNGDASQIFRDILNKCCPSEFCMKTFAHALYTNPNRSNEDMCKL

LGSLHSQQSSGINAEKMIKFSYDDLRKEYKSCLLYLSIFPHGYSIRRSTLVECWVVEGLITKEDWPSAIHHAERC

FDTLIDRWLIYPNDIGAAGKIKSCIVGNLVHEFITKIAKKQHIVEPRLSHHLARHFSIFNELQLRGSDRIDRFFK

NLSKSSQLSMLKVLDLEGCCCFKGKEHYLKDICSNILLLKYLNLRGTDITKLPHQINNLYDLEVLDIRQTKVPAF

ATKHVLLLKLKRLLAGSSISETTMSIRDKEPLSSYVRIPLGIKKMANVEVLFNVKVWTGQELKDIGKLWQLRKLG

VVIDDKDNLLKNLLTAISDLCECLRSLSITIVPCSTKREGTPSIGDLPEYISRCLKYRPKLLESLCLQGTTQKGE

LLTLLAERFTKLVKVGW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	456	740	1.4e-06
NB-ARC [Pfam fs]	693	740	1.4e-14

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	504	914	1e-16
RPM1 [A. thaliana]	547	1002	5e-11
Mla1 [Hordeum vulgare].	547	1022	2e-23
Pib [Oryza sativa].	547	1045	2e-22
I2 [L. esculentum]	550	982	4e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5144.m00168

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)