Report for 5160.m00059

 > 5160.m00059, length: 679, copies: 1 

MDKAAVVPLPITGGVNDDRTAALQQWASTVGFGGEVGRLVEAHRRLDSVLAETQGKEIRNKELQRRLREASHDAA

RARDLLGELEYYRIREEVERDDHDKNDLHFETEEVLVSPQALALNRKPPAILEAQFTQLLHDNANGNLLLSMPQR

DVEFFNNDAAKDDKDTTESSLSNTDSSASALQVTTYIASSSSPVPYLETLNKCISNEISKYTEKCYRIAKQVSEA

LELESLDYLYAHKYQRTRTDHRETSPCQSEPKVHGRDQQRDLIISKLTSEECARKKLSILAIIGDGGIGKTTLAK

LVFNNSTVSKHFDVLLWVYVSVHFDQNKIMQEMLDSFCGDEHDEIKKSKELQLQDKLDYLLKSKRVLLVMDDMWE

DSTKEKWDELLNPLLKNDVMGNSVLVTTRKPSVATMIEAADHINLDGLKKDDFWCLFKECVFGHENYKGEPRLEK

IGQQIVDKLKGNPLAAKTVSKVLRRSFDVDYWRRILHTGEWKYKNDENDIMPALMISYKYLPAHLQSCFSYCAVF

PKYHRYEKERLIDMWIAQDLLCSADIHTRPEDIGNEYFDDLLDWGFFEKQFEHSTLLIMHDLIHDLAQKVSSDES

FTIEGNEPRNAPPCVRHVSVITEWEYKTKLNGTVYPNDSFLQEFSNSFRELQQRSLSTLMLFGPHDLDFADTFRQ

ELNE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	242	551	8.2e-71
NB-ARC [Pfam ls]	242	551	2.3e-71

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	23	679	4e-80
I2 [L. esculentum]	161	619	4e-69
RPS2 [A. thaliana]	216	599	3e-23
Pib [Oryza sativa].	224	634	6e-28
RPM1 [A. thaliana]	248	601	9e-35
Mla1 [Hordeum vulgare].	258	601	6e-25
Pi-ta [Oryza sativa]	258	603	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	57	81

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5160.m00059

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)