Report for 5174.m00247

 > 5174.m00247, length: 1103, copies: 1 

MELVTGAMGSLLPKLGQLLNEYGLQAGLQKKIESLSWELESVHVVLRMVGQVPPEQLDQLVKLWAWDLREASYDM

EDIIDAFMVHIDGREDPADPHILRRLRKKISILFKKTKARREIAGAIQDINEKLEEVAARRGRYTVNNIVTKPVV

PEDIDPRLLNLYKRATELVGIEGQMDNLIKMLSLGNDIDLFDKTVRVVSVVGIGGLGKTTLVKAVYEKLKPGFDC

GAFVPVGQNPDMKKVLRDIIIDLDKKTYTDFNITLFDERQLINKLQEILQEKSLVSSSWGSFTVMRIYRCFIVID

DMWDKKSWGLIRCALQDSNHRSRVVVTTRVFEVATYVGDVYKTQPLSRNDSEKLLYTRIVQGEGKCLDSSLVEVC

DKFLKKCGGVPLAIITIASLLANKPQEDWSEVYSTIVLGHGGNDDVENTRRILSLSYYDLPLHLKPCLLYLSIFP

EDYYIEKNLLIWKWIAEGFVHEKQAPGVGLFELGEGYFNELINRSMIQPVEAEDKGYVDGCRVHDMVLDMICLLS

FEENFVTVLDGSEKQESPRIKTRRLALQHRNFEENRHQLGNVGVDQLRSFVVSECDGITVESPSFHVLRVLALEN

HFSRNYYCKHILQHLGNLHHLRYLGLQNVRTSELPDEVGDLKFLQVLDLSGTGIQELPESVGLLTKLLSLRANEG

TRVSAGSIVKLTSLQEMWICPADISQFVKVLGKLRELRVLHTSLFTHGQDERTDRDLLESLQNLHKIHTIDIGGS

SRMKSVMWEAGFTSPRRLRHLRLRSLVFYRMPVGINPLLLPNLCYLDLQVQIVKEQDMETLGRLPELRHLKLCSC

KTHVVSVEKAAGDGYFRKLRYFSTPCSFLRFDLHGVICSTKTIMPRLESLEFFVRVLFLRDANLLGFDKLLGFGN

HGRTSLRRVEATMACSGARVTEVEEAEAALAQVAAVHPNRPTLKTTRLGDSKIHSPYKEPTSVNPKVVFQNVNVR

EMKDDDGYFDFHWLLRNPWVKKFGVSIFCEDLRFRSFAYLKLVSHSQPEVVHRDVNVRKIKDKGRNIKFSWLLRN

QYVEKFRISINCENASLREVKEAEETAREVTWIHPNSPRVEIVRYGEDKMVSD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	152	475	5.1e-49
NB-ARC [Pfam ls]	152	475	1e-48
LRR [Pfam ls]	643	665	0.043

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	571	594	2.5
LRR [sensitive, ls]	571	594	67
LRR [sensitive, ls]	643	665	0.0016
LRR [sensitive, ls]	643	665	0.043

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	943	1e-155
Pi-ta [Oryza sativa]	1	739	3e-63
I2 [L. esculentum]	4	740	4e-38
RPM1 [A. thaliana]	15	817	1e-54
M [L. usitatissimum]	94	449	1e-10
Xa1 [Oryza sativa]	115	743	1e-27
Pib [Oryza sativa].	166	676	3e-56
RPS2 [A. thaliana]	197	667	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5174.m00247

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)