Report for 5174.m00249

 > 5174.m00249, length: 981, copies: 1 

MELVTGVLGSLLPKLGELLKDEYDLQRGTREKIKSLSRELESVHAVLRIVGEVPSEQLDELVKLWARDVRELSYD

MEDIVDTFLVRFNDGHEPDDPRVLRRLRKKMSKLFKKAKDRREIAGAIRRINEKLQEVATRRARYRVDSIVTKPA

GPVSIDPRIQALYKRSTELIGVDGPMDKIINMLSPRNDIHLSDKKKIISIVGFGGLGKTTLAKAVYDKLKPDFDC

GAFVPVGRNPDMKKVLRDILIDLDKQNYMHSNTTTTLDERQLINGIKDLVEKKRSIVIIDDIWDKKSWELIRCAL

QDSNCGSRVVVTTRISEVATHAGCVYNMEPLSRDDSEKLLYTRIASAEGKCLTRPSAVACEKILNKCDGVPLAII

TIASLLANKPEEDWSEVYNSIGFGHGGNNDVENTIKILSFSYYDLPSYLKACLLYLSIFQEDVEIDKNLLIWKWI

AEGFVQEKQAVRIGLFELAEGCFNELINRNMIQPEVSQYEWYGPKFQSDQVYEEGYVYGCRVHDMILDMIRSLSK

EENFVTVLDSHEQSELPLSHARRLALHGMSIEQQNRCQMANMAAEQARSFFANKCDDISLVFPYFRAVRVLGLEY

SADYGIWRHFRSLFHLRYLGLVGVNIKDLPKEVGDLKFLQTLDVKRTSISKLPDTVGMLTQLLCLHAYAAAPVGL

IGKLTSLQELWIIKPSAAAYMHHDENADDMCFSEKDAGDMYSDEKNAARQFVKDLGRLRELRVLRTKIDVMDDSI

ARDLLESLDNLHKIRYLEILGILWGMNVTWTRTGFISPWHLRRLCLVCIEFSRLPAWINSSALPNLSFINVTVQV

IQEQDMETLGMLPELYCLKLYSRYTNVVSIKHTGNGGYFQKLKSFKIVGSSVRFDLSCCDCSGGEIKSSFMPSLE

TFETDVHVRFLEDANMLGFDKLGLENLPSSLKRIIVVICCRDACDAEVEEAQAALEHAADIHPNNPTLKIDRYGE

EIKRPL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	154	460	4.9e-58
NB-ARC [Pfam ls]	154	460	3.8e-58

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	970	1e-154
Pi-ta [Oryza sativa]	7	656	2e-61
RPM1 [A. thaliana]	18	873	5e-57
M [L. usitatissimum]	20	434	4e-12
Pib [Oryza sativa].	167	927	4e-50
RPS2 [A. thaliana]	169	668	6e-22
I2 [L. esculentum]	194	656	2e-31
Xa1 [Oryza sativa]	197	936	1e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5174.m00249

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)