Report for 5258.m00111

 > 5258.m00111, length: 1117, copies: 1 

MYKERYRASYIEGVDIFMKTAKKNVASKKTKDIRCPCVHCKNRKIWKDPSVIEQHLVTHGFVARYTNWSHHGEIP

SKQVPNQATHSTVDDADYCNVSVDDGNFADLEEMLRHAEPEVVAGSARVLDNFDALKKAANDLLYDEAKGCEKIH

ASVNHCILFRKEYEDLDRCPTCKSSRYKTSRSQSEGQDVALDQKPEGCFWEDIRHSIDVMRLEKNVFDSTIGTIL

DIPIKTKDGLKSLFLAIAIRAVEPVHIKLVITKLCYFFNSISQKVIDPEELGPLRAFAIQTVCELEMCFPPSFFD

MMQHLIVHIVPQIIALGSLYLHQMWPFERYMSILKDYVRNRAHPEGSMIEGYTTEEVVECCIDYLKDGKAIGLPQ

LAIVEPYIEQHLHELQATNVGRSNAWIMKKHKHHFTEWFKYLDLPDGHTMEERTIKMLADGPSSVYTSWQAYDLN

GYTFYTKAKDKRSACQNSGVRVETIDTTGQKSTYYGFIEEICELDYGPNMQIPLFRCQWVKHPADVFVDNFGLTI

VDFDNVGHKDDPWVLAAPGPSSPPPGPPLCLFLLSTATPGIAAAAYATSPGSRSHRHTPPVISMDKPTQEQPTGD

KGKETQLVMEEDICMQVVAEESSSSSSSEPGSGSYHSPSDPHPSPAKKRKGGSDNEVDSDYVPPEPVWGLNYVMI

DLEKWVCRARSPDSERASYDLYYIPIDRLKMEIARGAMGSLLSKLGELLKEEYNLQRSVKKDIRFLSRERPMMHA

ALRMVGEVPLDQLDDLVKIWAREVRELSYDMEDIADTFKVHIEQGSQQADLGCTQGFARKMVNLFKKGRSHRQIV

NEIKNIKDRVKEVAERRDRYKVESISASYAQATATIDPRLTALFKKVTELVGINGARDMLIRRLSKGAGAFDEKL

KVVSVIGVGGLGNTTLAKAVYDILVHGGQFDCCAFASVGQNPDMKRFFKDILLQLDKHKYMHITAVTLMDDRQLI

NELLEFLDKKRYLIVIDDIWETSTWDLIKNALPDSNCESRIITTTRISKVAEQVGDIYNIQPLFDDNAEKLFYTR

IFGFDGKYPSNQLTEVSKKILKKCGGINPTMNGPRFMTLLGLDKKTARMFGTQERYCLLAITIYPFN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	860	1076	7.3e-32
NB-ARC [Pfam ls]	860	1117	7.2e-12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	706	1077	3e-17
Mla1 [Hordeum vulgare].	706	1077	2e-75
Pi-ta [Oryza sativa]	713	1104	6e-39
RPM1 [A. thaliana]	717	1077	4e-22
Pib [Oryza sativa].	766	1050	4e-12
Pib [Oryza sativa].	898	1077	5e-16
Xa1 [Oryza sativa]	900	1079	6e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	826	846

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5258.m00111

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)