Report for 5264.m00137

 > 5264.m00137, length: 954, copies: 1 

MAAALEAFAAKLANVLVGMAKEEVETLLGVPGAIAKLETTLADLSSILADADRRRIHDPGVERWVRELKDAMYDA

DDILDLFRAMEGGEDPGSPPRAAPAPSACWSALCRRSPAATRKIGRKIQELNRRVEEIAKRSSRFGFVSQIVRRC

HRRRYHRRWGIGKTTLARMVFNDAVLESHFDKKVWLSVNQEVNEVHLLHGVIAAFGGSYHGCAGDKALLEDTLKH

AVRQKRFLLVMDDVWSDRVWSDLLRAPLGACAPGSRVLVTTRNDGVARGMRAQHLHRVEKLDLGDSWSLLKKQVV

LNEGDESEIDGLEDIGLKIVERCDGLPLAIKVVGGLLLNKGKTRDAWVNVSNHFAWSMTRSNDDINKAVYLSYEE

LPPHLKQCFVFCSLFPKDELIIRGVIVRMWIAQGYGHDIMRSTLPEDLGVEYYNELVSRNLLEPYKRSYDLSAST

MHDVIRSFAQQIVKDEGLLVNDRQDVHGIAGASKLRHLSVSKTAIERVAIQKQVSLRTLLLFGRCITELTYFRNN

ISCLRVLHLQGVDLVDLPDYICHLKHLRYLGLANTGISAIPRGIGNLKFLQFIDLMGCRNFHQLPDSILKLQNMR

FLDFRGTRLTSIPPGMGKLENLVNMLGFPTYLDDRGHAWSSLEELRSLSNLKWLDLRGLELASSXSMAATAMLNS

KKHLKILDLTFASRLTDNGMIEGTSNVIEEQERAEVVLSNLCPPPCVECLTVNGYFGYRLPRWMRTMSDFPSLRR

LELKDYVCCKQLPVGLGQLPFLDYIWIDHAPSIVSIGHDLLFLSSSSADDQKVTTGTRITRKLQLHGLSRENFPS

LVELTSADNPKLQRISNSPRLRHIVVIRCPGLKVVKDLQSLRSVIWKDLDADALPEYLRETELNKLDVYCSLRLL

KLISLQDGSYEWEKIQHVQLLKAYGKRSTEDKVDRHIFYTKDPYSFEADMGEDL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	123	416	8.8e-53
NB-ARC [Pfam fs]	160	416	3.7e-60
LRR [Pfam ls]	528	550	7
LRR [Pfam ls]	551	573	0.34
LRR [Pfam ls]	598	620	0.77

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	505	526	4.2
LRR [sensitive, ls]	505	526	130
LRR [sensitive, ls]	528	550	0.22
LRR [sensitive, ls]	528	550	7
LRR [sensitive, ls]	551	573	0.011
LRR [sensitive, ls]	551	573	0.34
LRR [sensitive, ls]	574	597	1.7
LRR [sensitive, ls]	574	597	53
LRR [sensitive, ls]	598	620	0.025
LRR [sensitive, ls]	598	620	0.77
LRR [sensitive, ls]	650	676	3.3
LRR [sensitive, ls]	650	676	100

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	160	868	3e-66
N [N. glutinosa]	160	634	2e-11
RPM1 [A. thaliana]	160	748	3e-43
RPS2 [A. thaliana]	160	903	4e-33
Mla1 [Hordeum vulgare].	160	625	1e-45
Pib [Oryza sativa].	160	602	6e-39
Pi-ta [Oryza sativa]	160	678	7e-26
Xa1 [Oryza sativa]	160	855	1e-44

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	33	54

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5264.m00137

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)