Report for 5310.m00108

 > 5310.m00108, length: 520, copies: 1 

MARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPAS

DPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLCVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPP

LPFVFMQQHHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDG

TEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQ

RWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAKYQPGNHTHVSTRIMGTFGYIAPEFL

SSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMR

MMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGLPRSDLFTKQPNNYR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	203	402	6e-55
Ser/Thr pkinase [Pfam ls]	203	478	3.2e-53

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	131	476	7e-26
Xa21 [O. sativa]	179	289	1e-14
Pto [L. esculentum]	183	477	2e-57
Rpg1 [Hordeum vulgare]	192	400	5e-34
FLS2 [A.thaliana]	195	476	9e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	93	115	out -> in

Report for 5310.m00108

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)