Report for 5319.m00115

 > 5319.m00115, length: 658, copies: 2 

MQMLIVSLLMLLLSTPNLLVAKQLPFCSNANTITHMPEGTYKTNLLQLAKNLITNVNQTQLHSANGTAGAAGPDT

VYGAVLCRGDSSAESCATRLQRVLDTASINGTSGDDSGYFQNQKNVTLYDHDFQALLSFSDKDFISSFSNAPECT

VSAYLNPPPDADRAQFSQLFSELMEKIAAAVVSRRPVNYLTGRGWFDLKSQTVYALAQCTDGMPPENCRSCLDGI

IDEGKKMVGGGLTGGAVLGMRCSLWYQTDVKFFAGDPEVSLHMPTQQARFELRLLSMAVQNVINLWRIEEGNSGF

SLYDFSQIKEATQNFSRENKLGQGGFGAVYKGLLPGGLEVAVKRLSACSVQGLLEFKNEIQLIAKLQHKNLVKLL

GCCIEGEHEKMLVYEYLQNRSLDVFIFDFVKGAQLTWSKRLRIIDGIAQGILYLHNHSRVCVVHRDLKASNILLD

SDMTPKISDFGMARIFGSNMIESNTTRIVGTHGYISPEYAFDGVCSIKSDVFSFGVLVLEIISGKRTAGFYPYDG

KLCNLISYAWQLWRSGQGHELVCCRIGNNHKVIQRCIQVALLCVQERADDRPSIDQVVTMLNSEEMTLPKPNQPA

YFYVRSSGSDDSSCNNSISITLARQTVRQWTVISINMDGRVSGRAAIFKSKYELSATD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	315	514	7.4e-48
Ser/Thr pkinase [Pfam ls]	315	586	3.1e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	293	586	1e-43
FLS2 [A.thaliana]	303	586	3e-34
Rpg1 [Hordeum vulgare]	303	588	3e-41
Rpg1 [Hordeum vulgare]	303	587	7e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5319.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)