Report for 5319.m00128

 > 5319.m00128, length: 525, copies: 1 

MVSHWRRLIADNEHRKKLPQTLSGFFYESMNHERCPYTARHFTNVTGKGMPLVSPTFSFLPQCHDVDLLDCCNGL

LLCRCYVSRGTFQFHYAVCNPATKEWVMLPDANWAIEENHTACLCFDPAISSHFHVLEYVEEDEDSYVTLVTGVE

IYSSETGLWTLHENGWNDEVVISLSVNRRSVLLNGFLHSVTPADEIVAVDIEGKKWRKIPMPDPDGDIGIIHQTQ

GRLCAFNVDPNDIFKLSIWFLQDYDTDNWILKHTVGSMKLFGGKKYQLDYDYQVIAVHPECNLIFFVYGWHNTLM

AYEMDRKEVRVIRKLGHESCQSYLPYVPMFSESLPNGRWRRRECKQEHIQLCTNKKLHNILDFKGFSARQTSGIP

PGIWNLPKLQYLFLYTNQLTGDVVVNGKIGAASLIYLDISENQLTGTIPESFGSLMNLTNLVLMANNFSGEIRAS

LAQLPSLVIMKLFENNLSGQLPAELGKHSPFLRDIEVDNNDLTEPGVCDNFIITGELGREEGENDMWGPRGSYHF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	408	431	0.019

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	383	403	2.8
LRR [sensitive, ls]	383	403	59
LRR [sensitive, ls]	408	431	0.0009
LRR [sensitive, ls]	408	431	0.019
LRR [sensitive, ls]	432	455	1.1
LRR [sensitive, ls]	432	455	22
LRR [sensitive, ls]	456	480	0.75
LRR [sensitive, ls]	456	480	15
LRR [sensitive, ls]	481	502	2
LRR [sensitive, ls]	481	502	42

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	326	519	2e-17
FLS2 [A.thaliana]	357	487	7e-11
FLS2 [A.thaliana]	359	521	1e-14
Xa21 [O. sativa]	360	485	6e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5319.m00128

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)