Report for 5324.m00108

 > 5324.m00108, length: 788, copies: 1 

ADGTKLTAGYSRCRLKDKLDKIEKLIEKAQDIIKLANLPGNNNESGDHRRYVGVTAKHTSKPTAAYLPRKVIGRD

KDREEIISMLRDENQSSADRCFSVIGIHGIPGSGKTTLAQYVCEYEEEANHFDIVMWIHVSQNFGLDTILREMIE

QATKQPCPQFKSLTALQKRLKQDLCEKRFLLVLDDVEHNKDISEDDLSALEVGGAGSKILATSRTRDALLALGAV

RSKCIPISKLDEHVFRELFLQYALDGAEICERDRIVLQMIGADIAKKLKGSPLAARTVGGQLRIRQDVEFWRSVR

DKDFFSDAMEALRWSYQLLDEKVRRCFAYCSIFPRGHHLGRSKLINLWAAEGFISREEVGGDYFHKLVATSFLQL

ERKDSSGEEYYLLHDLLQDLAETVGRSDCCRIEGGCTGQVPRDDVRHLYIKACNGATVAGNKAFEKMITENIVKL

KELRTLIIDGGETGIEAKVFDDIFDSLKSLRVLIVETQSRRILQIPESIGYLKYLRYLSIEYRCRIFFPRTVTKL

YHLRVLDFGEYGMLERSCSPENMSNLVNLQRVVGRSLGDFPNIGRLTLLRTLPTFRVKRDLLGYDIKQLKHLNKL

QGKLVISGLQHVRSEEEAVEAKLAEKEHLKQLTLAWDDDNTSSNHDPAVLECLCPPMGLQVLEIIGYRGSYPGWM

VGKHSGQLYLQKLELRQCSPLGPAPRLFECFVHLESLCLSHLSWHTLPDNMEQVRTLKVLMISHCKNMKVLPTLP

QSLSRFKLSNCGHEFTRSCKQNGENWEKIQHILEKIIL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	54	359	1.2e-32
NB-ARC [Pfam fs]	99	359	1.2e-34

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	7	761	2e-75
I2 [L. esculentum]	20	761	5e-70
M [L. usitatissimum]	41	485	9e-14
RPM1 [A. thaliana]	60	747	3e-26
RPS2 [A. thaliana]	69	355	1e-17
Pib [Oryza sativa].	70	534	4e-23
Pi-ta [Oryza sativa]	70	532	1e-12
Mla1 [Hordeum vulgare].	74	587	4e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	14	38

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5324.m00108

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)