Report for 5340.m00343

 > 5340.m00343, length: 657, copies: 1 

MAACLAAVAASCQRKCGEIDIPFPFGIAGQPGCAMTGFKLSCNDTGNGVPTLLLRNVEVLGISLPLGQARMKMDM

SYDCYNTTRKDIDCVDMVDLNLKGSPFTFSDTANKFIVFGCRMLAYLGPGEQNDVGSNLTIGCAATCGIGDDLVS

INSAGCSGIGCCQTNIPKGIRYYKVWFDGRFNTTDIYNWTRCAYAALVETSSFNFSTVYNSLSRFNDNLGSQPPF

VVDWAIGNSTCEQAKTNSDSYMCISSNSVCLNSRNGPGYICNCQNGFEGNPYLNDSFGCQGKTKGVHMRCKLINH

RHIVKLFGCCLETEVPLLVYDFVPNGSLNQIIHGATSNRESSLSWDDCLRIATEAAGALYYLHSAASVSVLHRDV

KSSNILLDANYTAKVADFGASRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLNEKSDVYSFGVVLLELLLRRQPI

FECESGTKKNLSIYFLYEIKGRPITEIVAPEVLEEATEDEINTVASIAQACLRLRGEERPTMKQVEMSLQSVRNK

GFSSAGTSPESNHGMQPALSETYVNLHQPLGVHTIGIINLASSNCNSLQQEFMLSASFASPYTLCAGPGLLAHRA

GPAQRAGGEAQAWPGGQAGLTQARPKSGRAVLAPGQNAVPWAGPWGLGPYGHLYSIH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	225	521	4.9e-19
Ser/Thr pkinase [Pfam fs]	296	515	1.9e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	298	528	1e-22
Rpg1 [Hordeum vulgare]	298	531	2e-16
Pto [L. esculentum]	299	520	2e-38
Rpg1 [Hordeum vulgare]	300	522	4e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5340.m00343

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)