Report for 5340.m00349

 > 5340.m00349, length: 667, copies: 2 

MTKHDMDCVDKANLSLTGSPFTFSNSANKFTVFGCRMLGYLGPGGQSAVGSNLTIGCATSCGQGDDLLSINGEGC

SGIGCCQTAIPKGIKHYKVWFDTHFNTSVIHNWSRCSYGALVEEASFKFSTIYATSSNFSNPFGGEPPFVVDWVV

ANNTCAEARKHLDSYACASSNSVCIDSSNGPGYFCKCSQGFEGNPYLQGHDGCQDINECEDSNKYPCYGKCINKL

GGFDCFCPAGTRGDASVGPCRKEFPLAFGIAIGLGVGFGILLLVLTVAFLVRKRKNDIQKQLRKKYFRKNQGLLL

EQLISSDECATDSTKIFTLEELKEATNNFDPARVLGSGGHGMVYKGILSDQRVVAIKKPNIIREEEISQFINEVA

ILSQINHRNIVKLFGCCLETEVPLLVYDFVPNGSLNCIIHADPSMREFTLSWDQCLRIATEAAGALYYLHSAASV

SVLHRDVKSSNILLDANYTAKVSDFGVSRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLNEKSDVYSFGVVLLEL

LLRKQPIFDSESGSKKNLSIYFLSELKGRPVAEIAAPEVLEEATEDEINIVASIARACLRLRGEERPTMKQVEMS

LQSIRNKGFRSGTVSPEDSDELQTPQSEGHVDYHQATGIGINSMANLASPGCYSLQEEFMLSGSLPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	329	597	2.6e-45
Ser/Thr pkinase [Pfam ls]	329	603	2.6e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	255	607	2e-34
Rpg1 [Hordeum vulgare]	314	624	2e-31
Pto [L. esculentum]	317	602	2e-53
Rpg1 [Hordeum vulgare]	317	604	3e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	254	276	out -> in

Report for 5340.m00349

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)