Report for 5345.m00147

 > 5345.m00147, length: 582, copies: 1 

MARLLGVSLLVAGLGCALLVAPSESAADDGINCPSHVYLSALLAFKKAIFEDPLAKLSDWNSKDENPCGWTGVGC

SPFDSRVVTLELANSSLKGFLALEIESLSSLQKLILDHNTLMGPIPKGIGKLRNLIMLNLSTNQLDGPIPIEIGD

MPKISKIDLRANRLDGAIPPEIGNLTSLTELQLSNNSLTGTIPGSNDSSMVSTNRDGQIGLCRLTQLTDMDLSYN

YLAGDVPTCFMQIRRLSLVGNCFENNDTTNRPDNQCENSQKGNESSRVDGNQQKSFQQPLWLLILEVITAISLLT

VLTLCTIAGLRRCKARSSRNSGTWTRAISWKENTVISIDDDLLANVPKISRQELAEACEDFSNIIGSTHDTVVYK

GTMKDGSEIAVVSLSASVHYWTSYVELYFQKEARRTLHLVVEMARLSHENVAKMVGYSKESDPFSRMLVFQYPPN

GTLYEHLHDGEGYQLSWPRRMKIALSIARALRYLHTEMQPPFAVAALTSSSVYLTEDFSPKIIDFERWRALLTKP

GLSSGSIVNGSFNNIIDSRHRRFMDIQANTFAFGVILLELISGRAPVSKDTGDLVDW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	105	128	3.4
LRR [Pfam ls]	153	176	6.8
LRR [Pfam ls]	177	201	0.13
Ser/Thr pkinase [Pfam fs]	418	485	2.3e-09

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	81	104	3.1
LRR [sensitive, ls]	81	104	63
LRR [sensitive, ls]	105	128	0.17
LRR [sensitive, ls]	105	128	3.4
LRR [sensitive, ls]	129	152	0.97
LRR [sensitive, ls]	129	152	20
LRR [sensitive, ls]	153	176	0.33
LRR [sensitive, ls]	153	176	6.8
LRR [sensitive, ls]	177	201	0.0065
LRR [sensitive, ls]	177	201	0.13
LRR [sensitive, ls]	216	239	2.4
LRR [sensitive, ls]	216	239	48

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	17	243	5e-26
FLS2 [A.thaliana]	39	251	7e-24
CLV2 [A. thaliana]	40	251	1e-15
Xa21 [O. sativa]	50	458	1e-20
CLV2 [A. thaliana]	78	249	7e-11
FLS2 [A.thaliana]	80	251	2e-15
FLS2 [A.thaliana]	80	263	2e-14
FLS2 [A.thaliana]	80	244	1e-13
FLS2 [A.thaliana]	80	244	3e-12
CLV2 [A. thaliana]	82	248	2e-16
FLS2 [A.thaliana]	85	581	2e-33
FLS2 [A.thaliana]	85	245	1e-16
FLS2 [A.thaliana]	85	251	2e-14
Cf-9 [L. pimpinellifolium]	87	211	2e-11
FLS2 [A.thaliana]	88	231	3e-18
Pto [L. esculentum]	352	582	9e-16
Rpg1 [Hordeum vulgare]	363	573	3e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	288	310	out -> in

Report for 5345.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)