Report for 5372.m00175

 > 5372.m00175, length: 773, copies: 1 

MVCRRASIPAATEAAAVASWPLGPLALALALAILSAMPHVALSQNLTCKDVPFPFREERSGATSVPGFMVTCGRN

NEAMLRIGEHIYKIDKVSVPEHFITIRAGPIQQVCYDRSRRPKQIKPITRVDPAPAPTSLQATPFTFSRRNKLVA

TGCNYRFFANFTSSSGGGDGTPTSCDTWCNDGSSDTIFNGSCADKACCTTEMQMDGAQEFNLTLKPSGNVEASTC

SAVFFLDKDEQVFTSAGDGRNMALKEALVPLGYRKMFLDWAIPGNCEQNSASQYPCGSMSTCNDVYNGTSYICRC

NEGYEGNPYEQNGCSGLDVCAHPERNPCMYPEYCKDEQGVTSCACPEGRNGDGRKKGSGCKRHFPLDTALGVGLA

LTVTLATTLLCYYWTMKKRKVARKRAELFRKNGGLLLQQRFLMITSQGEESSAKIFSAEELKNATDNYSDGRILG

RGANGTVYKGILPNRTTIAIKKSILFDESHVEQFVNEITILSQIDHPNVVKLLGCCLETKVPLLVYEFIPNGTLF

QHIHNKRTLTWEDCLRIAEETAGALAYLHSTSSTPIIHRDIKSSNILLDENFVAKIADFGASRSVPSDHTHVTTL

IQGTIGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTRQKPISVGRPEESCNLAMYIVILLNERRLLQEIEPQILV

EAGEEQIYAVAQLSARCLNVKGEERPVMREVASVLHGLRESFDEEQIIRSDESIQIINEQESVHSEARPISSLQS

SDETSTTQYSLPSEILSASHLER

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	443	640	3.7e-60
Ser/Thr pkinase [Pfam ls]	443	710	7.3e-58

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	420	642	7e-31
FLS2 [A.thaliana]	429	721	5e-37
Pto [L. esculentum]	431	706	6e-54
Rpg1 [Hordeum vulgare]	431	706	2e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	20	42	in -> out
putative TM domain	368	390	out -> in

Report for 5372.m00175

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)