Report for 5372.m00176

 > 5372.m00176, length: 707, copies: 1 

MVSSMVLAQLLLLCLLSLSSSSSSQISPLKCPNSSVDIPFPFKIATNSSLTSTPGFAISCRQTGPMILLGGNYSV

LSISLLEGYVRVTGQTVYSSQCHNNSQGIIDLTATNYMFSHTQNKFTAVGCDAMAMIRNSSDVVGNTNSTVMSRY

SGGCVSFCASNGSIISGECSGVGCCQSSVPKGLNKLDLEFTSIRDQLMPPTSAVGSGSTRCSKAFIAEQDSYVFS

RHDLYKDLGNLPMVLDWYIQGGNCKEASRSRQTYMCKENSYCYEVEDGAGYRCNCSGGYTGNPYIGCVGGSLGLM

AVLIVLGFWTYWIVKKRRLAKQKQRYFLQNGGLLLQQQIFTHQAPARIFTTSELEDATNNFSDDRIVGRGGYGTV

YKGILSDQTIVAIKKSKLVDQSQMEQFINELIVLSQIDHKNVVKILGCCLETEVPLLVYEFISNGALFHQLHNTN

LVPISWEHRLRIATETASALANLHLARKVPIIHRDVKSANILIDENYTAKVSDFGASRLVPSNQTHVTTLVQGTL

GYLDPEYFYTSQLTDKSDVYSFGVVLVELLTRQKPISYHRQEEGINLASHFTALAQQNRLQEIVDCVVVKEAGMR

HVNVVSHLILKCLKLKGEERPRMVEVAIELEALRRLMKQHLSLKSEKALRELMEQQSAEDCQEMQLLQEESGQEK

MSNIEPLKLYHRDSASDKCMESSPLLSMDLPW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	361	560	8.4e-51
Ser/Thr pkinase [Pfam ls]	361	626	2.8e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	345	555	7e-26
Rpg1 [Hordeum vulgare]	347	655	5e-31
FLS2 [A.thaliana]	349	634	3e-37
Pto [L. esculentum]	349	638	5e-54

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	292	314	out -> in

Report for 5372.m00176

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)