Report for 5372.m00177

 > 5372.m00177, length: 661, copies: 2 

MAKMMLYLLLLPLLLLTCIFASYVHSMESSTSKCSNIPIPYPFGILGGNPAPAQGFEITCASSGPMVRINNIMFG

ILNISLLDGFVSILASATSQQCKRNSSFSLEGTNFTFSDTRNKFTALGCDMVAMLLNGSSGYSGGCASFCSTKSN

IIDGMCSGVACCQAPVPKGLKKLELEFTNITGQLSRPKEVNNTPTCGEAFIVEQNSYVFSSVDLSNTNRNNPQYR

PVVLEWSIDGGYCEEANRFMSYACKENSYCYNSSNGIGYRCNCSLGFQGNPYLQGPDGCQVTGLALLLLLLVLIF

WTHWLVKKRKLAKIRQRYFMQNGGMLLKQKMFSQGAPLRIFTSSELEKATNSFSDDNIIGRGGFGIVYKGILSNQ

MVVAIKKAQRVDQNQMEQFINELVILSQVNHKNVVQLLGCCLETELPLLVYEFITNGALFSHLQNTSVLISWEDR

LRIAVETASALAYLHLATKEPIIHRDVKSSNILLDENFTAKVSDFGASRPIPHNQTHVTTLVQGTLGYMDPEYFQ

TSQLTEKSDVYSFGVVLIELLTRQKPISDGRTDDVRNLACHFSMLFYQNQLLEIVDSQVAEEAGTKHVKTVAQLA

LRCLRSRGEERPRMIEVAIELEALRRLMKQHLVLQTEEDPLLCESGQHADVNIEASSEFEP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	353	612	1e-56
Ser/Thr pkinase [Pfam ls]	353	624	5.9e-56

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	290	625	8e-38
Rpg1 [Hordeum vulgare]	339	621	6e-37
Pto [L. esculentum]	341	629	6e-56
Rpg1 [Hordeum vulgare]	341	624	3e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	72	94	out -> in
putative TM domain	286	305	in -> out

Report for 5372.m00177

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)