Report for 5373.m00108

 > 5373.m00108, length: 936, copies: 1 

MDDIVGILKGAAGLAADANAFREFFNWAAPRVWDAVRSQQQQHLLQVDPRGVGSASARDNRIASLHQIEADLQKL

ENDLWLIQSTTSTMYDLIDRLKWHSHKDTEAWHLRQIKYVVYDAEDLLDEYNYYALKVKVDASKNLGQDHSHETF

LEFLDSVNFSKVMEIQNRLKQVFDQSKGLGFHKTPKKFDRLVRPETCRVLDKPDKIFGREKELKELKQKLGVCGR

KRSRPVACSTIAEARRTELPVLPIVGMGGVGKTTMAQQICEDGVVRKHFDCIIWICVSDEFEVNRLTKDVLKSLG

VKSQHSDTRDTLMVNLRDSVNAKKFLLVLDDMWDDVLKDERGWRIFHRTLSNGLQGSMILVTTRSSKVANLVSNS

DPYELNGLQNDVFWDFFKLCAFRSNSSSNSPELEHIRPELERIGKAILPKLKGSPLAAKTLGRLLKSNLSIEHWE

DILRSELWKLEQEETDILPALRLSYVYLPRHMKRCLSICALYPKDHRFEKEFLADIWVAQGYVEAEDASSCFNDL

VNRSFFQKAAGQNNIYVIHDLIHDTAQLVSKDECFIIQHVSDLPKIPSKVRHLSIFTNGNISCTELVTICTQNKK

LRSLVCNESYKSIKQFAPVIDCWFKELPSIHVLIFKISTVRKLPKSIGNSKHLRYLGLLGSSTFETLPSSVSCLY

HVQTINAKGCVFKRYPKGFSDLISLKKIESKGFLYNKDKDKQLLEWSTKGITDEQLQMTKEQIELLPHWNLEHLE

IVSYLGVSEASSRHTVGVFSSLSNVIIMNCDALLSLDEFLMPAYMPVVKTIHVKRCEQLALVPVDELHRFSHLED

LCIAYCPKLNMQRRMTLPSSLQMLSLARCPSIKYIDNSHLGSSMTLKGLNLILIRCPDLISILGAISVSEIESGY

IDGCPKLMEIKQPFNYKRPRLIIGDVQAMNNDERSR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	188	518	2.4e-62
NB-ARC [Pfam fs]	239	518	4.9e-62

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	97	907	2e-79
Mla1 [Hordeum vulgare].	109	681	5e-33
Pib [Oryza sativa].	174	704	2e-24
Xa1 [Oryza sativa]	206	703	3e-70
RPS2 [A. thaliana]	243	921	8e-28
Pi-ta [Oryza sativa]	243	682	3e-21
RPM1 [A. thaliana]	246	701	4e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5373.m00108

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)