Report for 5380.m00180

 > 5380.m00180, length: 783, copies: 1 

MARQGFRPRFPVQTHTTNPHDGLIRLNKFVSRFSATIGAVVFQLLVTTTTLSAAAPTPIALPGCPESCGGIQVPY

PFGIGDGCSYHGFNLTCDDEAHHHQTPPKLFMATDNGTVVQVLNISLPDGTVRVRSKLSQSSIAGSSSSSSNASS

SRSDLPADGPFTVSSAYNWLVAFGCNIVADLTPYGNIADGSSCAATCIDGWQNFAGPSCSGIARCRTSVGRGVHS

YTIQVTSLIDRNSMGASTSTTWAAAFVAEQGWFSANENAMLYNFTNWLPFTVESVPVVLEWWLDLIRDGAILPLS

VGPNTTDFRCLSLHSSSYYNDLNYDRRRCNCSQGYEGNPYIRDGCRDIDECQQPDVYPCHGTCINMPGTYRCLAK

KSVKSLPGLITIIAVSAGFGLLFSLLGVAKITNKIKQRRAKKLRRKFFKKNHGLLLQQLISSNKDIAERMKIFSL

EELDQATNKFDQNRILGGGGHGTVYKGILSDQRVVAIKKSKIVVQREIDDFINEVVILSQTNHRNVVKLYGCCLE

TEVPLLVYEFISNGTLSFHLHGQNENPLKWKDRLRIALETARAIAYLHSAASISVLHRDIKSTNILLTDTMTAKV

SDFGASRSISIDETGILTIIQGTYGYLDPEYYYSSRLTEKSDIYSFGVILAELLTRVTPVFSSETSERTSLASYF

VSFIRDNRLSDILDSQIVNEVGAEDAKVVAKLAEACLRLKGEERPTMRQVETTLEDVQRSKVQLNHQIARVSNSN

TLKNQTYEGSKCYEGTRQYSLEKEFIQSSEFPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	460	725	4.9e-51
Ser/Thr pkinase [Pfam ls]	460	725	3.8e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	440	729	9e-37
Pto [L. esculentum]	448	730	7e-53
Rpg1 [Hordeum vulgare]	448	767	3e-27
Rpg1 [Hordeum vulgare]	448	732	3e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	382	404	out -> in

Report for 5380.m00180

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)