Report for 5397.m00197

 > 5397.m00197, length: 988, copies: 1 

MPLLRGGLVSVVLLLLASPFFFSANPAATAVGDCPLDFSWANFTLASAACSDPTQRAACCRYINAFVAISMARYA

NATGRLGVPPAFSEICLSSVSETFKLRGIPTDADVFCGLGPKIRVSYQCAGRDTVLEMLQSPNFNDVVGSCRGPL

SLDITCKTCLNYGIVYLHRLIGSDDNVGLSVCRNAVFVTLATQQGIFSYDDIVKCFFGVQGITIFPGPSSVTSTP

ASSPNVTTPVDAPAPKTKTVLQKHHQPYRITVIPGIGIAVILLAVLLQLVLVILIRRKNRELKNADLHAQNPENA

FCQSQSWRCPEGQSPMFQRYSYKETMKATNNFSTVIGKGGFGTVYKAQFSDGSIAAVKRMDKVSRQAEEEFCREM

ELLARLHHRHLVTLKGFCIERKERFLVYEYMANGSLKDHLHSSGRKALSWQSRLQIAMDVANALEYLHFFCNPPL

CHRDIKSSNILLDENFVAKVADFGLAHASRTGAISFEAVNTDIRGTPGYMDPEYVITQELTEKSDIYSYGVLLLE

LVTGRRAIQDSRNLVEWAQGHLSSGKITPEFVDPTIRGLVDMDQLHLVVSIVQWCTQREGRERPSIRQVLRMLSE

RLDPGNGSFGEGMEDAEGGFYPRNSKCGVHRNELIPHSGDMSLASVSELHCQIKKKLEREQRSKQIKKKKTRKMH

AKTDSEVTSLAPSSPPRSPTSRGGRPVYYVQSPSRDSHDGEKTATSVHSTPALSPMGSPRHSVGRDSSSSRFSGH

PKRKGDKSSSGRKGAPAGKGWQEIGVIEEEGLLDDEDERRGIPKRCKYFLIFVLGFVVLFSFFALVLWGASRSQK

PQIVIKSITFDNFIIQAGTDASLVPTDMATTNSTVKLTYRNTGTFFGIHVTADPFTLSYSQLTLASGDLNKFYQA

RSSRRTVSVGVMGNKVPLYGGGPTLTAGKGSGSMAPVPMILRTTVHSRAYVLGALVKPKFTRAIECKVLMNPAKL

NKPISLDKSCIYL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	330	529	2e-50
Ser/Thr pkinase [Pfam ls]	330	600	1.4e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	241	617	6e-38
Rpg1 [Hordeum vulgare]	318	599	1e-31
Pto [L. esculentum]	319	602	6e-56
Rpg1 [Hordeum vulgare]	329	532	6e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	258	280	out -> in
putative TM domain	798	820	in -> out

Report for 5397.m00197

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)