Report for 5399.m00126

 > 5399.m00126, length: 475, copies: 1 

MGNCFGSEEAEAAATVRAPAQGHHGRRQDSDQISNLAAEAAAPANRRSPIMAPPKALASMSSAAGHHSGMRSSSS

MSSITTRSSSSSSNLPLGAAGGADVGVAGALYPEPEGRILEVPNLRIFTFAELRAATRNFKPDSVLGEGGFGRVY

KGWVDERTMSPARSGTGMVIAVKKLNPESVQGLQEWQSEINFLGRLSHPNLVRLIGYCVEDRELLLVYEFMAKGS

LENHLFRKGSAYQPISWNLCLRIAIGAARGLAFLHSSERQIIYRDFKASNILLDTHYNAKLSDFGLAKNGPTAGE

SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGMRALDTGRPAPQHSLVEWAKPYLADRRKLARL

VDPRLEGQYPSRAAQQAAQLTLRCLSGDPRSRPSMAEVVQALVEIERIRSRPKAASSREDASPRVPTRSGGHGHH

HHHHSSRPRSGSDGARSGYPSPRVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	135	419	1.7e-59
Ser/Thr pkinase [Pfam ls]	135	419	5.1e-60

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	107	421	2e-25
FLS2 [A.thaliana]	120	435	1e-27
Rpg1 [Hordeum vulgare]	121	427	8e-32
Pto [L. esculentum]	123	417	5e-54

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5399.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)