Report for 5433.m00141

 > 5433.m00141, length: 913, copies: 1 

MVEKLYAESAQEQGKLLCIESLLQDLHTLFRMVHRKISGINDSALLMISANNEQYHQLLQRLWSLTLDIDDMLNK

VSCYLTKTRVLSIPAKHRDISTPIGFAMEQHMHTTQKGILVKGKTEVDDVLTMMQADHGKAGLLAEFLNTRQCNT

VDSESLQCLVKQRLCGRKFLIVLDDVWGQNLQKWKLLIEVLESAKSGSKMIVTSRVPDVVTMTNSLRPYTLKRLL

PIDSSNLLTQWMQNSAELPPRLIPIRKMIADTCCGVPSLLLSASNKLKSIRKTEVAWQHVLSRFDLVFYADPLLL

DATYVSYQQLPSNIQQCFLYCSLFPVHSFTPEQLTGMFVADDLIKLSSSKSDMHMYFSKIMTEHYYDVMQKPRHK

AYAIYKMHPGMQLLAQMISRGFHLAIDARKELVWPVENAKKTPELPTELFEMGNLRTLILLRDEKMLLSDKKCSI

TDIPEEFCKCLIDMRVLHMQSCRIKRVPKLIGMLKKLAYLNLSHNDIEIIPDSICNLQFLKNFNLSRTEIAELPE

SVGKMQALQVLDLSHCEKLLHLHESVSNLVNLQILNLEGCHYLAILPRSMKNLKSLAYLNVLECPLLTQMPCQMN

QLRNLEILPRYIAAENHEHTISELRPLVSLKELSICNMENASFDDARNVILQKKNRLVSLALSWTGSCTDPMISS

KAQQILELLKPNRGLKVLCIFSCPAKKLPSWITSMPAYLKSLTEIKLVNLACECLPPLGQLPLLKIVELSGINAV

TRVGDEFYGDDGTFASLEKLSFFHMRNLEIWLPSQREAIFPNLQELTITQCPKFRAVHVKLPVVKSLIMLLNNDK

LIGSRGALEGFSQNLKSLSVSLCDGLLECSECEGLRELRGIEELHISRCTELISLPHGMQHLSFLRTLTITECTN

LETFPEWLKNSPL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	50	349	2.4e-09
NB-ARC [Pfam fs]	161	205	6.4e-10
NB-ARC [Pfam fs]	299	349	1.4e-06
LRR [Pfam ls]	486	508	0.028
LRR [Pfam ls]	532	555	2.9
LRR [Pfam ls]	556	579	8.8
LRR [Pfam ls]	889	912	9.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	463	485	1.5
LRR [sensitive, ls]	463	485	29
LRR [sensitive, ls]	486	508	0.0014
LRR [sensitive, ls]	486	508	0.028
LRR [sensitive, ls]	509	531	1.4
LRR [sensitive, ls]	509	531	29
LRR [sensitive, ls]	532	555	0.14
LRR [sensitive, ls]	532	555	2.9
LRR [sensitive, ls]	556	579	0.44
LRR [sensitive, ls]	556	579	8.8
LRR [sensitive, ls]	716	737	2
LRR [sensitive, ls]	716	737	40
LRR [sensitive, ls]	792	812	3.8
LRR [sensitive, ls]	792	812	77
LRR [sensitive, ls]	865	888	0.47
LRR [sensitive, ls]	865	888	9.5
LRR [sensitive, ls]	889	912	0.45
LRR [sensitive, ls]	889	912	9.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	151	644	4e-16
Xa1 [Oryza sativa]	154	901	7e-21
I2 [L. esculentum]	156	909	1e-51
RPM1 [A. thaliana]	164	536	6e-17
RPS2 [A. thaliana]	167	812	2e-14
RPP5 [A. thaliana]	471	905	4e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5433.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)