Report for 5433.m00142

 > 5433.m00142, length: 896, copies: 1 

MLVHRSIEKDVFEPLVMRISEIAQHYFGTVGSSETGEKGPTVPEFPEKIKWEVQHLEELFEGIKEDKEEVYEGFK

SVSLAISEWQRRLAIAYQNAARDPRPFEGMKWAMEYHEMWVEDNNIIGAGDEILDFDEHELFESLRYVKTAQGGS

EAHLLESIKSGMQCIKNVLATIRSRKEADNRSWCIVEQVFSPLLKLLKTINHLVSEAAARNNKSENYKILVKIDA

EVNCLQDALDLIDRNKNEVYENFRLIEDLILPLLTFLKATYNDQSESLSFLDAVKHGVNYLEAFSPLLTCMYTFR

RISLETLAHEDKSDAFILLDRIRDDSSQLKDVLQMVQEKENGIYSNFDAIEEHIDEIYDGHMNVEGSLKLNQMGG

LRDKLQLIHEEITNIRGKVDDSFKVQEVSCHVMRMAAAHEASSSHQLSASNTFCITMESAQMWQLKVIIDELETR

LRHCLLCLAVFPVDAIIKKRLLIHWWIGECFVTSVSEGKSFFNKLLLSNGFITPVKKYHCDKVHSCKVQPWIRGL

LIEAAKSKAFVELSSDGSSRNDFTRTRRACLHAGKILTNFHPDVLTIYNIKQQYVELNKTWFSEKNRLTTLQLGQ

WHDASYDPRAHHVEINNAKFLKQVKSCKQLKYLSLRGISRIEALPNSIGKLSRLVILDLKACHNLEDLPKEIVKL

VKLEYLDVSDCYLLSGMPKGLGKLFQLEVLKGFVLSNAKSKDLCHLNELVMLKKLRKLSIRIGYSIDSGQFANFG

ELCALRSLTLIWGAHPISTHGSSPSHAAPHAMPCVLPLGLEKLELRCFPLVELPHWVSPEKLRKLKKLYISGGNI

SDLGDLKSWEVTVLRLRFLKHMNYSWTALHDSFRKLDVLEAHECENLQPWPSCGKGLWRKEPNGTIAPVLT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	445	487	4.3e-08
LRR [Pfam ls]	677	700	1.6
LRR [Pfam ls]	814	835	7.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	629	652	1.1
LRR [sensitive, ls]	629	652	22
LRR [sensitive, ls]	653	676	1.2
LRR [sensitive, ls]	653	676	24
LRR [sensitive, ls]	677	700	0.079
LRR [sensitive, ls]	677	700	1.6
LRR [sensitive, ls]	814	835	0.35
LRR [sensitive, ls]	814	835	7.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	440	881	9e-11
Pib [Oryza sativa].	445	681	1e-13
Mla1 [Hordeum vulgare].	447	727	1e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5433.m00142

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)