Report for 5443.m00133

 > 5443.m00133, length: 810, copies: 1 

MAPSFEVDCNNTANGFKPFVGNVEVISLSNGQARVMNHVSSSCYNRTSRQMNPADVWYLNLTGTPYRLSDSANKF

TVIGCRTLAYTFDDYNVGKYMSGCVSVCRRGDLSSAINGSCVGIGCCQTNISTGLSYYEVMFDYTLNTSGIYNRT

PCSYAVLMESSSFTFSTTYLTSRAFNTSYGGQAPLVLDWAIRTANNCVEAQKNPASYACKGDYSVCLNSTNGPGY

ICNCKKGYQGNPYLQDSNGCQGSFLHCQIMSLSARSREKQVKLRRMSLCVPEGRAQHSWLRAKGTKPRRLSSALG

VVDQRSWSSSSRKDIMSFAKPTDLPVLIFPVGKEPYNKFKGFYRAEYFKNNIQLGGLHGRKDINECQDSNNYPCH

GECHNKPGDFDCFCRAGSRGNATIPGGCRKDFLPLKAQLAIGIAACVLAGLFAFLGWEVIRHKRSIRKQALLRQT

DEFFQQHGGQLLLEMMKAEGNIGFTLYKRVEIETATKNFNKAQIIGEGGQGTVYKAVLDGTVVAIKKCKEIDESR

KMDFMQELVILCRVNHPNIVKLLGCCLQFEAPMLVYEFVENKTLQELLDLQRSKRFHVTLGTRLRIAAESADALG

HLHSLPHPILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQSMLKGTPGYIDPEYLLEYQLTAKNDVYSFGVIL

LELLTSKRPLSKESKTLASMFQEAMMDGTFHELLDSEIIDEASMGVLHQIAVLAIQCLALPGMSRPVMEQVAKEL

RRLALSDEVQQCPQPPLVLEGLNFAVMGSMCTTSLLYTEGNSTGVYDLEKKTVMSTEFAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	489	710	1.1e-42
Ser/Thr pkinase [Pfam ls]	489	746	3.3e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	476	755	1e-31
FLS2 [A.thaliana]	481	753	3e-29
Pto [L. esculentum]	481	750	2e-39
Rpg1 [Hordeum vulgare]	482	753	2e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	413	435	out -> in

Report for 5443.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)