Report for 5443.m00142

 > 5443.m00142, length: 546, copies: 1 

MKKAYLDNCMTYAKMRVTWRCSKKLVKRSLESGRLKIRLERNNTFSKESCRYCIINHPSLHVKELASKSFQKPAQ

SDHQKIKDYLKWYLCSTNANVDLIQSHEINVLMTTMKGIGGFWLCYGFGEGVGEAKGDEPSRGEVGQGRRHWAIV

TVAVLLAGVKHQRGSTTGICATLLVALTSLLGIEWIKYKQRIKRHDLMRKRGEYFNLHGGQLLTDMMNIENNISF

KLYDRDEIELATKGFDKMSIIGEGGQGTVFKGYNLDQVNNPVAIKMCKGFDENSRTEFTQELLILSRVNHENIVK

LIGCCLQFEVPVLVYEFVPNKTLHYLIHSQNDPSIRTLEIRLKVAAESAEAFSYLHSLDHPILHGDISDFGCSKI

RAADGHDDVVKGTIGYLDPEYLLKFELTDKSDVYSFGVILLELLTRRTPLSKQKVSLASVFQEAMKEGLFLELID

TEILHEDNMGLIGDLARLACQCLAMTSESRPTMSRIAEELRRIEKQVRQHRGVLTSISSLSLSASSSADTSEHFT

GETNGYDSLRRVAAMSIEFAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	240	366	1.5e-21
Ser/Thr pkinase [Pfam ls]	240	486	1.9e-25
Ser/Thr pkinase [Pfam fs]	367	486	4e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	213	504	2e-34
FLS2 [A.thaliana]	214	501	2e-25
Rpg1 [Hordeum vulgare]	233	493	2e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5443.m00142

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)