Report for 5443.m00146

 > 5443.m00146, length: 489, copies: 1 

MLTKGGDGETATGKPAAGSSGRQRWSGGVPRREAADGDRDDRGAERAISVVPGGEEAVAGVWLGVADPREETAQS

GVDRGGGATQMETANTAAISGLVTCVFVGLFGFLGWEVIRHRQNTKKQALLRQTDEFFQQHGGQLLLEMMKVEGN

VGFTLYERGQIETATNNFNKAHIVGEGGQGTVYRAEIDGTIVAIKRCKEIDESRKMDFVQELVILCRVNHPNIVK

LLGCCLQFEAPMLVYEFVQNRTLHELLDFQRNRSCHVTLGTRLRIAAESADALAHLHSLPHPILHGDVKPANILL

TEELVAKVSDFGCSTIDEKTQVAPKGTPGYLDPDYLLEYQLTAKNDLYSFGVILVELLTGKRPLSKERKTLTSMF

KEAMTDGTLIKLLDSDIVNEDNLRVIHQAAVLASQCLIIPGTARPEMRYVAEQLQQLAFADEVQQDPQPPLVLAG

LRFTAEMANTRTTSSWQTDSKTTGVYSLEKNVRLCSRIT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	168	379	8.3e-38
Ser/Thr pkinase [Pfam ls]	168	431	1.6e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	156	432	5e-28
Rpg1 [Hordeum vulgare]	159	366	4e-18
Pto [L. esculentum]	161	440	1e-34
Rpg1 [Hordeum vulgare]	161	440	6e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	92	114	in -> out

Report for 5443.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)