Report for 5464.m00170

 > 5464.m00170, length: 591, copies: 1 

MSCQRKCGDIEVPFPFGIDGDQPGCAKPGFELSCGNNTESGVPILLRKVQPLSRSVEVLGISLPKGQLRMRMHMS

SHCYNMTTRVMDCVDNGWMDLTGSPFTFSDSANKFTAFGCQVLAYLGAGEQRDIGSNLRIGCAASCGKDDSATIG

GGRCSGIGCCQTAIPKGIKYYKAWFDDRFNTSSMYTWNRCAYAALVEESSFNFSMIYDSSSKFNSDTVSSQPPFV

VDWVMGNISCKEARKNLGTYPCISNNSICLDSQNGPGYICNCRKGFQGNPYNKGLDSCQDINECDDPKKYPCYGK

CINKLGGFDCFCPAGMRGNASVGPCRKDFPLGIEELKEATNNFDPTRVLGSGGHGMVYKEAAGALYYLHSAASVS

VLHRDVKSSNILLDSNYTAKVSDFGASRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLNEKSDVYSFGVVLLELL

LRKQPIFDDGTGTKKNLSIYFLSEIKGKPITEIVAPEVIKEAIEDEINIFASIAQACLRLRGEERPTMKQVEISL

QSIRNKVLSSGSASSESNHEIETPLCESYVDLHQTMGVDINGIANLISSNCYSLEHEFMLSASFGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	276	527	2.4e-09
Ser/Thr pkinase [Pfam fs]	364	455	4.5e-20

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	357	528	4e-16
Pto [L. esculentum]	361	521	3e-28
FLS2 [A.thaliana]	362	534	4e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5464.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)