Report for 5473.m00184

 > 5473.m00184, length: 683, copies: 1 

MLQVARRASSLLRRSPSPRISKVSKNLLTKLKTQHQIAKDIKVIKKQVIEVSERFTRYKVDEGTSKLQNSTIDPR

VCAIYKDASDLVGIHEPVEDIIKCFTYEDELAKDLKVVSIVGFGGLGETTLANQVYRKLAAKFECRAFVSISRNP

DIRSILKSLLSQICNQEYVQTDAWDENQIISTIKKLLEKKRYVLKLSRGHPRCFPLEICSGPTKSTLRYWYLTES

FPIVESNNAHPAQLDPTIGNDLVPYRFFVQPFDRSLVQPLEIRIDGQARSCRVHDTIHDFLLSKSIEENFAATIN

YPQLTCLSTPDMKIPTIFWGAKQLPTFSNFSTLRVLDLWFCAECGLENHHLETVTRLSQLRYLTIQGKKITELPR

KFGDLKCLEVLDVIATSVKELPKSTTQLQRLAVLYVNDGTKLPDQFKNMQMLEEVVGIDVFRHSMEFLEGLCELK

NLWRLSINWDIDRLEGNKVRYKEIIASSLCKLEACNLHDLSIHVHLRNNDDFSSLLLPLNSIKSFVLRGESISMV

NIWQSSLVSIRRLALTIKDIDQDDLQVLGSIPSLTNLYLCLDPDQNERSIAISDIHGFQQLEPFTFQSTHTGLMF

EAGSMPRLGQLSFGINVANFKSTYGGFCLGIQHLSCLTMVSVSTNRLGAKLGYVEAVEDAFRCMVEAHPNQPTLE

IETDNLCE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	71	194	3.8e-16
NB-ARC [Pfam ls]	71	349	3.5e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	22	194	6e-25
Pi-ta [Oryza sativa]	110	253	1e-14
Mla1 [Hordeum vulgare].	247	683	8e-31
Pib [Oryza sativa].	252	416	1e-11
Pi-ta [Oryza sativa]	252	393	3e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5473.m00184

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)