Report for 5479.m00107

 > 5479.m00107, length: 571, copies: 1 

SSFAVDCGSNRLISASDNLRYQTDDASLGPASYSVTGAPTWGVSNVGKFVDAPNGSYIIYSSRQFQNTLDSELFQ

TSRMSPSSLRYYGIGLENGNYTVTLQFAEFGIEDTQTWKSLGRRVFDIYLQGERQEKNFDIRKAAGDKSYTVVKK

SYKVPVTKNFLEIHLFWAGKGTCCIPGQGYYGPTISALSVTPAVLGLVALVGIFMWRQKRRKLTLEQQELYSIVG

RPNVFSYSELRSATENFSSSNRLGEGGYGAVYKGKLNDGRVVAVKQLSQTSHQGKKQFATEIETISRVQHRNLVK

LYGCCLEGNNPLLVYEYMENGSLDKALFGIEKLNIDWPARFDICLGIARGLAYLHEESSIRVVHRDIKASNVLLD

ANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTLEEDK

IYIFEWAWELYENNNPLGIVDPNLREFNRAEVLRAIHVALLCTQGSPHQRPPMSRVVSMLTGDTEVTDVLMKPSY

ITEWQIKGGNTSFANSAVRGQSSSAPGSTSQQASSVFLNSIIQEGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	242	447	4.9e-58
Ser/Thr pkinase [Pfam ls]	242	512	2e-54

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	193	510	2e-39
Xa21 [O. sativa]	193	324	3e-14
Pto [L. esculentum]	230	507	2e-59
Rpg1 [Hordeum vulgare]	230	511	3e-38
Rpg1 [Hordeum vulgare]	230	510	6e-33

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5479.m00107

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)