Report for 5484.m00131

 > 5484.m00131, length: 1715, copies: 1 

MGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRLEVGMRSVEMVLAAAAARGRELVGNEPLSRSL

DDLRQLLFDAEDVVDELDYYRLQLEIEQREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVD

FVMAHAGSKRKRGQYELAQDDATVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVPKEGVVSN

RRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTLAKFVYRDRRIKDHFDLQMWVCVSS

IFDEVRLTREMLEHACRDRQDCEKISSFNVLQEMLMGSVRNRRFLLILDDVWEDKDKNGWNRLLGPLRQNQTVGC

MILATTRSPSVAKKIRTLTSVELKGLDDDNFWLFFKQCAFGDENHGDHPSLQVIGQQIVKTLKGYPLAAQSVGAL

LGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKFDGEKLIFAWISQSFVSC

KDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELAQAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYD

EVEHDSFPTDKFERQLEKITCLKKLRTLMFFGHGPYGSRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIK

PFHLRYIEFFNGSITFEKSCWWETEDGPRIYNVDPQGSSSNLVPRRINNLVNLRHLIADKERHSEIANVGRLTSL

QELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLIDKDYLENLCLVWDDSTTNLKPAMATAE

EVLEGLHPNRNVKRIKIRGYNGAICPMWLGSNVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVDVS

IPSLDELVLIDLPNLEKCIGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKD

LKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLTSFQVLQVLPPHCEEKTWLPN

MNKLKVHSCPHFIVSCPFPPSAELSKVSVSIRGVLAPPAIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNF

RIINCPNLVSVSFEALSQLMSLQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQS

EQLTVNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESIRNGPILFHMPHLLYTYVKKLHISDCPNLVFCSRKV

GFAGFTSLEELTVTRCPKLLMPMVHEGVSDDHIGGRFLLPPLLNQFETDHLSEKLQLYFPENHTSLRRLSVWDSP

SLICLQLHSCTKLEELEIFNCKNLCTLGGLTFLSSLKIMKLARNPKLSTSWEFDSQDQQCTGDQAGDLSILSGLE

WLETDDFSVLTMSFFKHLNSLQHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQLHCLSS

LKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVLIDGKPRLSVIACAIALNRCWTAD

RLSIRGLLHPSMCVLCDQHEESIDHILVACPESRQLWWLLLSAISRPECLPVNEISFHSWLCDKRETFPSSQRRG

FDTIATLAAWTIWKEWNNRVFNQKQRSWTEVARAMAEEAALWRLTNTAMPAMPLGRLGRNIVSRE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	222	528	2e-58
NB-ARC [Pfam ls]	222	528	1.5e-58

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	1017	1039	0.63
LRR [sensitive, ls]	1017	1039	13
LRR [sensitive, ls]	1362	1384	0.72
LRR [sensitive, ls]	1362	1384	14
LRR [sensitive, ls]	1500	1524	0.65
LRR [sensitive, ls]	1500	1524	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	3	1581	1e-172
Pib [Oryza sativa].	145	682	2e-25
RPM1 [A. thaliana]	182	570	8e-28
I2 [L. esculentum]	223	1299	7e-83
RPS2 [A. thaliana]	232	1047	6e-31
Pi-ta [Oryza sativa]	234	690	2e-19
Mla1 [Hordeum vulgare].	238	550	5e-25
Xa1 [Oryza sativa]	868	1551	1e-43

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5484.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)