Report for 5484.m00133

 > 5484.m00133, length: 1083, copies: 1 

MEEVEAGLLEGGIGWLAETILENLDADKLDDWIRQVGLADDTKKLRSEIERVDGVVAAVKGRAIWNRSLARSLRR

LRELLYDADDAIDEIDYHRLQHQVQRGDAWHGDPDESADGHGAEQTGRPRRGKVGEASGSGGKRRSGIWQHFESV

ENNAKARSCSSCSASEGGANSFAAGNSVGRKRMRTEGASADNVAASMHPWNKTELSNTIQQMTHQLQEAMNEVMK

LRGSDNFVSSNFHHNTTSDSRLKTSSLLQRKMYGRVDEKNSIIKMITEAKSDGVTVIPIVGIGGIGKTALAQFVY

NDPDVKSLFEDKMIWVWLSNNFDEEQLTREMLDVVCQKKQEGSCNFSKLQEILKSHMKPTRYLLVLDDVWDDMNN

YRLNKLLAPFNSNNAEGNVIIMTTRIWSVAKRIGTVKPIELGALEKEDSWMLFKQCAFGDENHELCGSLSIMGQK

IEDKLDGNPLEAENIGELLREHHTVEHWNNILKNEDWKSMQLSGGIMPSLKRSYDMLPYQLKQCFLYCSLFPKGY

SFSKEQLIQIWIAQGFVEKSSERLEQKGRKYLAELVDSGFYQHVERTSEHFVMHDLMHDLAKLVSQSEFATIDGS

ECEELPSTIRHVSILTDSAYNKYEDGDFSRNEEFERRLLKVRSRSKLKTLVFIGEYDSHFLKSFQDAFKEAKHLR

LLQITSILVYCTHLRYLGLENETQRTLPQALSKCYHLQVLHIGSCGTPNIPEEINNLVSLQHLVAQKGVWSSIAN

IGEMTSLQELTNFKVENSIGFEITQLQRMSELVELGVSRLENVTTKQEASGASLKDKHHLERLHLFWKGVRNGYD

SDGNYNEYDSDLSYSDSDMNSENECDGNMIPEPSMHSETEEERLQTTDSNDVPSLDHIPDTASEVLEGLEPHRNL

KYLWISWYNGAKAPTWLATSLTHLQTLRLENCGEWQRLSLERLSLLRKLVLIKMKNASPISKALMMSSKCANSRM

MKKKRCIPFSMNWTLEPSQTVLRLFIDSEMLMMMMMTMDLHKLFFGPLTDDETLMLMKVLHKLFFGPSLSDDDHV

DKLRHGDDEVTMKASSDGELVMIKANSDSELVM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	241	547	5e-62
NB-ARC [Pfam ls]	241	547	2.5e-62

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	1	961	0
RPM1 [A. thaliana]	200	798	6e-34
I2 [L. esculentum]	202	949	1e-68
M [L. usitatissimum]	217	593	4e-11
Pib [Oryza sativa].	245	740	3e-26
RPS2 [A. thaliana]	255	815	7e-26
Pi-ta [Oryza sativa]	256	722	6e-20
Mla1 [Hordeum vulgare].	257	815	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	201	227

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5484.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)