Report for 5496.m00151

 > 5496.m00151, length: 480, copies: 1 

MSDYNNNSNKSTSTAVNYTVWIDYDGIGHKISAYMANDGQLKPSKAIFAGHLTMSNRVPNKAYIGFFASGSDGET

YGLLSWNITVDRVPDSGIAASKSKNKPFETGFTTVIVVFSFFSVSLIVILVFQSKKNSDAKQLLDEVLSQLARKL

KYSEIRNATGNFTDARRLGRGSFGVVYMGTLTTQRNGRTQEQRQQQVAVKKFDRDENQQRRFTDFLVEIQVIIRL

KHNNIVQLIGWCLEKRALLLVYEYKHNGSLDNHLFGNHSRQQQVLPWPTRYSIVRDVAAGLHYIHHELEDIKSSN

ILLDQEFRACLGDFGLARVISGGRSSASMELAGTRGFIAPEYAQNRVATRRTDVYAFGALVLEIVTGRKALDHSR

PSDSVLIANWVRDEFHNNGKLLEAVDGSLTTEEGLQYDADDAERLLLLGLSCTSHSASDRPSMEMVVQIVAKPVP

RPVVVVPRVEPAFVGSSSAEIDDASSLGRR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	162	372	7.4e-44
Ser/Thr pkinase [Pfam ls]	162	444	1.1e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	97	447	3e-25
Pto [L. esculentum]	129	438	3e-39
Rpg1 [Hordeum vulgare]	148	442	3e-26
Rpg1 [Hordeum vulgare]	155	447	3e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	63	85	in -> out
putative TM domain	105	127	out -> in

Report for 5496.m00151

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)