Report for 5517.m00141

 > 5517.m00141, length: 900, copies: 1 

MVLSVGQLLGEEYRQLRGVGGEVAQLRDELATMNALLRMQSEAGEGAVDHFVREWMRQVCEVAYDAEDCIDLYFC

RCRVRLQLSDGVLSWARHLASTLFPRRRLAGDIKALRARAIEISERHARYGVNREELRGWTVSAAALVPATAAAF

HPAACGSDQLVGIEGQANTLADKLKAVDESSNLKVFSIVGFGGLGKTTLAMEVCRKLESVFQRQAMVSVSQAFDA

SKDLQVLLKRIILQIIKPKKSNENSINEEQSTGDIDSMDVSTLFQKLEVSLTGMRYLIVIDDVWSTSAWNAIQSK

LPENNCGSIIMVTTRVETVAKASSSPSVSGDYMHKINPLGEKDAEKLFVSRAFGYKESCCPEDLKEQMKSILKKC

ARLPLAIVSIAGLLSSYRSSSSGSIRMWQRISNSIGSQMEIHPTLEGMKQIIALSYNHLPHHLKACMLYLSIFPE

DYVTKKKRLLLRWIAEGFVMEKRGLTMFEVAESYYDELVSRSLIDAVRVRLDGTVKAVKVHDMMLEVIVSKSLEN

FVNFLGAQYGGGTPSYDSVRRLAIHGDGGPKHVVDVMSATHVRSLSTFGAQGNIAVLHRLAEFTLLKVLDLEDCK

EVKDCHVKYICRLFLLRFLSLRNTDVSTISSQISRLQHLQTLNLYGTRIENLPTSVTMLERLEYLFFSERWSMRR

WEIPVGLKKMMALCTLRTIRLPNDPNVVKEIGALAQLQTLDITILNSSEEVLANLADALDKTNNLRSLYAYGTGK

DEHKDRLLNFLLRLKTPPLLLESVRIDGVMDQLPKWFNSLLPNLASVSLGYDSCTDDELLVRSAFKFPALKSFYV

DPYIMPRAIRFEKSTMEKIETFRVFFYDNDGTGRPILAGIENLTSLKKLEVLTHSINAEIEILEWLKVERARHQV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	133	474	1.5e-55
NB-ARC [Pfam fs]	158	474	1.2e-57
LRR [Pfam ls]	638	657	6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	615	637	0.64
LRR [sensitive, ls]	615	637	13
LRR [sensitive, ls]	638	657	0.29
LRR [sensitive, ls]	638	657	6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	769	1e-79
RPM1 [A. thaliana]	8	836	1e-68
Pi-ta [Oryza sativa]	55	642	1e-65
Pib [Oryza sativa].	154	665	2e-57
RPS2 [A. thaliana]	155	665	1e-18
I2 [L. esculentum]	160	691	1e-39
Xa1 [Oryza sativa]	178	665	4e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5517.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)